Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHSSSCSSSSSSCCCCCSSSSSSSCCSSSSSSSCCCCCCCCCSSSSCSSCCCCCSSSSCCCCCCCSSSSSSCCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YDRVDGLLHQLTLQSNQRIQALELVQTLEARESGLHQIEVWLQQVGWPALEEAGEPSLDMLLQAQGSFQELYQVAQEQVRQGEKFLQPLTGWEAAELDPPGARFLALRAQLTEFSRALAQRCQRLADAERLFQLFREALTWAEEGQRVLAELEQERPGVVLQQLQLHWTRHPDLPPAHFRKMWALATGLGSEAIRQECRWAWARCQDTWLALDQKLEASLKLPPVGSTASLCVSQVPAAPAHPPLRKAYSFDRNLGQSLSEPACHCHHAATIAQLVRQDEFVVRTGRHKSVRRIFLFEELLLFSKPRHGPTGVDTFAYKRSFKMADLGLTECCGNSNLRFEIWFRRRKARDTFVLQASSLAIKQAWTADISHLLWRQAVHNKEVRMAEMVSMGVGNKAFRDIAPSEEAINDRTVNYVLKCREVRSRASIAVAPFDHDSLYLGASNSLPGDPASCSVLGSLNLHLYRDPALLGLRCPLYPSFPEEAALEAEAELGGQPSLTAEDSEISSQCPSASGSSGSDSSCVSGQALGRGLEDLPCV |
1 | 4gzuA | 0.14 | 0.11 | 3.61 | 1.12 | SPARKS-K | | ----------------MEDEAYFIAKEILATERTYLKDLEVITVWFRSVLIKEEAMPAALMALLFSNIDPVYEFHRGFLHEVEQRLALWESSAHLDHQRIGDILLRNMRQLKEFTSYFQRHDEVLTELEKATKHCKKLEAVYKEFLNTFLLKPVQRLVHYRLLLSRLCAHYSPRDYADCHEALKAITEVTLQQSLTRLENLQKLTELQRDL-------------VGVENLIAPGRE--------------------------------------FIREGCLHKLTKKGLQQRMFFLFSDMLLYTSKSV--TGASHFRIRGFLPLRGMLVEESNESVLHCFTIYAA----QKTIVVAASTRLEKEKWMQDLNAAIQAAVLLNT----TMHVCWYRNTSVSR--ADHSAAVENQLSGYLLRKNG-WQKLWVVFTNFCKTHQDDYPLA-------------SLPLLGYSVSLPRKDYVVYFFRAESKYTFERWMDVIKRAS----------------------------------------- |
2 | 4d0nB | 0.12 | 0.08 | 2.70 | 1.09 | CNFpred | | --SWSRIIDFLKQQKKDVVKRQEVIYELMQTEFHHVRTLKIMSGVYSQGMMADLLFEQQMVEKLFPCLDELISIHSQFFQRILERKKESLKSEKNLIKRIGDVLVNQFSNAERLKKTYGKFCGQHNQSVNYFKDLYAKDKRFQAFVKKKMSSSVVRRLGIPECILLVTQRIT--YPVLFQRILQCTK--DNEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRLNEIYTKTDSKSIMRMKS--GQMFAKEDLK------------------KKLVRDGSVFLKNAARLKEVQAVLLTDILVFLQEK-----DQKYIFATVISLKKLIVREVAHEEKGLFLISMGM-TDPEMVEVHASSKEERNSWIQIIQDTINTLN----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1kz7A2 | 0.28 | 0.07 | 2.10 | 2.00 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLIAITGYD-------------GNL-GDLGKLL-QGSFSVWTDHFKPQRHLFLHEKAVLFCKKREENGKAPSYSYKQSLNT-AVGITENVKGDTKKFEIWYNAR--EEVYIIQAPTPEIKAAWVNAIRKVLTSQLQACREASQHRALEQSH------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 4h6yA | 0.12 | 0.08 | 2.95 | 0.49 | CEthreader | | ----------------------------------------------------HMDKAYFIAKEVSTTERTYLKDLEVITSWFQSTVSKEDAMPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWDVMLKNIQGMKHLAAHLWKHSEALEALENGFELQKVCYLPLNTFLLRPLLMHYKQVLERLCKHHDCRAALAEITEMVAQLHGTMIKMENFQKLHE--------------------------------------LKKDLIGIDLVVPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSR------SNQFKVHGQLPLYGMTIEESED--PHCLTLRGQR----QSIIVAASSRSEMEKWVEDIQMAIDLAETMVHVCWHRNTSVSMVDFSIAVENQLS-------------------------------------------------------------GNLLRKFKWQKLWVVFTNFCLFFYKSHQDNHPLASLPLLGYSLTIYVFKLHFKSHVYYFRAESEYTFERWMEV |
5 | 1sjjA2 | 0.07 | 0.06 | 2.48 | 0.87 | EigenThreader | | -------------------RLERLDHLAEKFRQKASIHESWTDGKEAMLQQDYETATLSEIKALLKKHEAFESDLADRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRRKLLETIDQLYLEYAKRANWMEGAMEDLQDIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTEINGKWEHVRQLVPRRDQALMEEHA--------------------------RQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNY------------KPKIDQLEGDHQQIQEALIFDN------KHTNYTM---------------EHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHF------DRKKTGMMDCEDCLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN-------YDELRRELPPDQAEYCIARMAPYNGRDAVPGGESDL |
6 | 1sjjA | 0.12 | 0.10 | 3.64 | 0.77 | FFAS-3D | | -SDINNAWGGLEQAEKGYEEWLLNEHLAEKFRQKASIHESWTDGK-EAMLQQKDTATLSEIKALLKKHEAFESDLQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLNNWMEGAMEDLQDTIVHTIEEIQGLTTAHEQFKATLPDKERQAILGIHNEVTPQEINGKWEHVRQLVPRRDQALMEEHARQ--------------------------------------------------QQNERLRKQ------FGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGW-EQLLTTIARTINEVENQQMNEFRASHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMS----IVDPN-----------RM-------GVVTFQAFID----FMSRETADTDTADQVMASFKILGDKNYITVDERELPARMAPYNGRDAVDYMSFSTALYGES--DL--- |
7 | 4d0nB | 0.11 | 0.07 | 2.52 | 1.05 | SPARKS-K | | AESWSRIIDKFLKQKKDVVKRQEVIYELMQTEFHHVRTLKIMSGVYSQGMMADLLFEQQMVEKLFPCLDELISIHSQFFQRILERKKESLVDKSEKNDVLVNQAERLKKTYGKFCGQHNQSVNYFKDLYAKD---KRFQAFVKKKMSSPECILLQRITKYPVLFQRILQCTKD-----------------NEVEQEDLAQSLSLVKDVIGAVDSKVASYEKKVRNEIYTKTDSKSIMRMKSGQMFAK--------EDLKRK------------KLVRDGSVFLKNAGRLKEVQAVLLTDILVFLQEKDQ-----KYIFASLISLKKLIVREVAHEEKGLFLISMGMTDP-EMVEVHASSKEERNSWIQIIQDTINTLN----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 3bjiA | 0.14 | 0.08 | 2.68 | 1.08 | CNFpred | | YDKRCCCLREIQQTEEKYTDTLGSIQQH-----FLKPLQRFL--------------KPQDIEIIFINIEDLLRVHTHFLKEMKEALGTP------GAANLYQVFIKYKERFLVYGRYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNG----RFTLRDLLMVPMQRVL----KYHLLLQELVKHTQEAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITN-----------------QLSIENLDQSLA--------------HYGRPKIDGELKITSVRSKMDRYAFLLDKALLICKRR-----GDSYDLKDFVNLHSFQVRD--KKWSHMFLLIEDQ--GAQGYELFFKTRELKKKWMEQFEMAISNIYPEN-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3qmzA | 0.07 | 0.05 | 1.88 | 0.67 | DEthreader | | -----------------------LSMFELDKLKLIAVQLAVHLLIFLLNSKRGIILCGP-PG-SGKTMIMNNA-RN-----------------------------------IKN-TIERIHI--I---SEYLSPRELTEAWRIFAVKEKNS-------QDLGNISSTD-LRIDRALKQVQSMNTLLAND--ISSPALFNRC-II--NW-MT--TM--VA--NM--V--MEFTDFIVVIGIISSYEMSLDSIHSDIIFLRRVRLVH-FVTSIETRIFDITLTE-------ENAEM---------RKREEKKLSEEEPQNVESIGKSVK----------IKTRAARTR--------------------VDEILWLLYQETALDKKFKMIMAMTMF----YKFDIESEQ---D-NDDLRYLWDTTKSYISA--------------L--------N-WFK---NWNIADVVA------------GTFKLI----------------IPLGSIAEISWILLQ--IQMSLSWVKTYLHKHVEPAL |
10 | 4gzuA | 0.10 | 0.08 | 2.93 | 0.87 | MapAlign | | -------------------EDEAYFIAKEILATERTYLKDLEVITVWFRSVLIKEEAMPAALMALLFNIDPV--YEFHRGFLHEVEQRLALWSSAHLKGDHQRIGDILLRNMRQLKEFTSYFDEVLTELEKATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLVH-----YRLLLSRLCAHYS--PGHRDYADCHEALKAITEVTQSLTRLENLQKLTE----------------------------------LQRDLVGVENLIAPGREFIREGCLHKLTKKGLQQRMFFLFSDMLLYTS-KSVTGASHFRIRGFLPLRGMLVEESNEWSVLHCFTIYAAQK----TIVVAASTRLEKEKWMQDLNAAIQAAKPPVLLNTTMHVCWYRNTS-------VSRADHSAAVENQLSGYLLRKNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLVSLPRKDYVFKLQFKSHVYFFRAESKYTFERWMDVIK---------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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