Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCSSSSSSSSSSCCCCSSSSSSSSSSSSSCCCCCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSSSSCCCCCCCCCHHHHHHHCHHHHHHCSSSSSSCCCCCCCCCSSSSSSCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC MGENEASLPNTSLQGKKMAYQKVHADQRAPGHSQYLDNDDLQATALDLEWDMEKELEESGFDQFQLDGAENQNLGHSETIDLNLDSIQPATSPKGRFQRLQEESDYITHYTRSAPKSNRCNFCHVLKILCTATILFIFGILIGYYVHTNCPSDAPSSGTVDPQLYQEILKTIQAEDIKKSFRNLVQLYKNEDDMEISKKIKTQWTSLGLEDVQFVNVVGFVMGLTSPDRYIIVGSHHHTAHSYNGQEWASSTAIITAFIRALMSKVKRGWRPDRTIVFCSWGGTAFGNIGSYEWGEDFKKVLQKNVVAYISLHSPIRGNSSLYPVASPSLQQLVVEKNNFNCTRRAQCPETNISSIQIQGDADYFINHLGVPIVQFAYEDIKTLEGPSFLSEARFSTRATKIEEMDPSFNLHETITKLSGEVILQIANEPVLPF |
1 | 4tweA | 0.22 | 0.17 | 5.38 | 1.17 | DEthreader | | -------A--DLDLEILETVMGQLDAHRIRENLRELSREPHSPRDEDLVQLLLQRWKDSGLDSAEAST-YEV---------LLSFPSQQPNVVDIV-------------GGIIHSCHR-TEENV--------------G--------GPDV-VQPYAAAPS-----------------------------------VSVYN--RL----ELRNSSNVLGIIRGAVEPDRYVLYGNHRDSWV-HGAVDPSSGTAVLLELSRVLGTLLKGTWRPRRSIVFASWGAEEFGLIGSTEFTEEFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPDLSIYIVPSLGSLGAGSYAPFVHFLGISSMDIAYTYDSKTSAIYPTYHTAFDTFDYVDKFLDPGFSSHQAVARTAGSVILRLSDSFFLLM |
2 | 1suvA | 0.16 | 0.15 | 5.06 | 2.28 | SPARKS-K | | ----------LYWDDLKRKLSEKLDSTDFTSTIKLLNEVPREAGSENLALYVENEFREFKLSKVWRDQFVKIQVKDSAQNSVGYVAYSKAATVTGKLVHFGTKKDFEDLPVNGSIVIVRAGEKVANAESLNAIGVLIYMDTPGFPSFNHTQFPPSPNIPVQTISRAAAEKLFGNMEGDKTDSTCRMVTS--ESKNVKLTVSN-----VLKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWG-PGAAKSGVGTALLLKLAQMFSDMVLDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCE---DTDYPYLGTTMDTY-KELIERIPELNKVARAAAEVAGQFVIKLTHDVELNL |
3 | 4tweA | 0.20 | 0.19 | 6.13 | 1.11 | MapAlign | | -------APQDLDLEILETVMGQLDAHRIRENLRELSREPHLARDEDLVQLLLQRWKESGLDSAEASTYEVLLSQGGPDVVQPYAAYAPSGTPQGLLVYAGAEEDFKELLEGTIALTVGRGAKAVNAAKHGVAGVLVYPAVPSSFRVDLANVSGFPPIPTQPIGFQDARDLLNGTLAPATWQGALGCHYRLGPGQVNVSVYNRL-----ELRNSSNVLGIIRGAVEPDRYVLYGNHRDSW-VHGAVDPSSGTAVLLELSRVLGTLLKGTWRPRRSIVFASWGAEEFGLIGSTEFTEEFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEISPGDLSIYDNWLGSLGAGSDYAPFVHFLGISSMDIAYTYDTSARIYPTYHTAFDT-FDYVDKFLDPGFSSHQAVARTAGSVILRLSDSFFLPL |
4 | 4tweA | 0.20 | 0.20 | 6.40 | 0.80 | CEthreader | | ------LAPQDLDLEILETVMGQLDAHRIRENLRELSREPHLASSPRDEDLVQLLLQRWGLDSAEASTYEVLLSQGGPDVVQPYAAYAPSGTPQGLLVYRGAEEDFKELQTQGIKLGVGRGAKAVNAAKHGVAGVLVYTDPADINDGLSSPVSGFPPIPTQPIGFQDARDLLCNLNGTLAPATWQGALGCHYRLGPGFRPDGDFPADSLELRNSSNVLGIIRGAVEPDRYVLYGNHRDSWV-HGAVDPSSGTAVLLELSRVLGTLLKKTWRPRRSIVFASWGAEEFGLIGSTEFTEEFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPGPGDLSIYLGSLGAGSDYAPFVHFLGISSMDIAYTYDKTSARIYPTYHTAFDTFDYVDKFLDPGFSSHQAVARTAGSVILRLSDSFFLPL |
5 | 1suvA | 0.16 | 0.16 | 5.19 | 1.51 | MUSTER | | ------------LYWDDLKLSEKLDSTDFTSTIKLLNENSYVQKDENLALYVENEFREFKLSKVWRDQHFVKIQVYLVENPGGYVAYSKAATVTGKLVHANTKKDFEDLYVNGSIVIVRAGEKVANAESLNAIGVLIYMYTPGFPSFNHSRSSGLPNIPVQTISRAAAEKLFGNMEGD-CPSDWKTDSTCRMVTSESKNVKLTVSNV-LKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWG-PGAAKSGVGTALLLKLAQMFSDMVLKGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCE----DTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNL |
6 | 4tweA | 0.19 | 0.18 | 5.88 | 3.28 | HHsearch | | ------LAPQDLDLEILETVMGQLDAHRIRENLRELSREPHLASSDLVQLL-LQRWKDPELDSAEASTYEVVDIVGPTDVVQPYAAYAPSGTPQGLLVNRGAEEDFKELKLEGTIALTRYGAKAVNAAKHGVAGVLVYTDPADIPPTPYSFVSGFPPIPTQPIGFQDARDLLCNLNGTLAPATWQGARLGPGDSQVNVSVYNRLE-----LRNSSNVLGIIRGAVEPDRYVLYGNHRDSWV-HGAVDPSSGTAVLLELSRVLGTLLKGTWRPRRSIVFASWGAEEFGLIGSTEFTEEFFNKLQERTVAYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPGPGNWIPSLGSLGAGSDYAPFVHFLGISSMDIAYTYDRSARIYPTYHTAFDTFDY-VDKFLDPGFSSHQAVARTAGSVILRLSDSFFLPL |
7 | 6h7yA | 0.23 | 0.22 | 6.79 | 1.85 | FFAS-3D | | ---------------KAFL-DELKA-ENIKKFLYNFTQIPLAGTEQNAKQ-IQSQWKEFGLDSVELAGNEIFNTSNVSDIVPPFSAFSPQGMPEGDLVYRTEDFFKLERDMKINCSGKRGNKVKNAQLAGAKGVILYSDLTPGYPANEYAYRPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGPGFTGNFSTQKVKMHIH-----STNEVTRIYNVIGTLRGAVEPDRYVILGGHRDSW-VFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKRISKLGSGNDFEVFFQRLGIASGRARYTKNWEKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPF |
8 | 1suvA | 0.13 | 0.12 | 4.24 | 1.43 | EigenThreader | | -LYWDDLKRKLSEKLDST-----DFTSTIKLLNENSYVPREAGSQKDENLALYVENEFREFKLSQVKDSAIIVDKNGRLVYLVENPGGYSKAATVTGKHANDL------YTPVNGSIVIAGKKVANAESLNAIGVLIYMDHLGTGDPYTPGFPSFNHTQFPPSSRAAAEKLFGNMEGDCPSDWSTCRMVTSESKNVKLTVS-------NVLKEIKILNIFGVIFVEPDHYVVVGAQRDAWG-PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQVEKLTLDNAAFPFLAYSGIPAVSFCF---CEDTDYPYLGTTMDTYKELIE-RIPELNKVARAAAEVAGQFVIKLTHDVELNL |
9 | 4mcpA | 0.23 | 0.21 | 6.59 | 3.26 | CNFpred | | ------------------AFLDELKAENIKKFLYNFTQIPHLAGTFQLAKQIQSQWKEFGLDSVELAHYDVLLSY-VSDIVPPFSAFSPQGMPEGDLVYVNRTEDFFKLNCSGKIVIARYG-KVKNAQLAGAKGVILYSDP-GDPLTPGYPAN-LPSIPVHPIGYYDAQKLLEKMGSAPPDSSWRGSLKV-STQKVKMHIHSTNE-----VTRIYNVIGTLRGAVEPDRYVILGGHRDSWVF-GGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAAEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGF-MPRISKLGSGNDFEVFFQRLGIASGRARYTKNWKFSGYPLYHSVYETYELV-EKFYDPMFKYHLTVAQVRGGMVFELANSIVLPF |
10 | 1z8lA | 0.23 | 0.18 | 5.55 | 1.17 | DEthreader | | ---------------NMKAFLDELKAENIKKFLYNFTQIPHLEQNFQLAKQIQSQWKEFGLDSVELAH-YDV---------LLSYPNKHPNYISII-------------GNEIFNTSL-FEPPP----------------------NVSDIVPPFSASPQG-----------------------------------MHIHS--TN----EVTRIYNVIGTLRGAVEPDRYVILGGHRDSWV-FGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLLGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPFSLYWMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWTNKFGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLLM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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