>Q56UN5 (318 residues) MKCPKTSFGIKQEHKVLISKEKSSKAVHSNLHDIENGDGISEPDWQIKSSGNEFLSSKDE IHPMNLAQTPEQSMKQNEFPPVSDLSIVEEVSMEESTGDRDISNNQILTTSLRDLQELEE LHHQIPFIPSEDSWAVPSEKNSNKYVQQEKQNTASLSKVNASRILTNDLEFDSVSDHSKG TNSISQEIMDSVNNEELTDELLGCLAAELLALDEKDNNSCQKMANETDPENLNLVLRWRG STPKEMGRETTKVKIQRHSSGLRIYDREEKFLISNEKKIFSENSLKSEEPILWTKGEILG KGAYGTVYCGLTSQGQLI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MKCPKTSFGIKQEHKVLISKEKSSKAVHSNLHDIENGDGISEPDWQIKSSGNEFLSSKDEIHPMNLAQTPEQSMKQNEFPPVSDLSIVEEVSMEESTGDRDISNNQILTTSLRDLQELEELHHQIPFIPSEDSWAVPSEKNSNKYVQQEKQNTASLSKVNASRILTNDLEFDSVSDHSKGTNSISQEIMDSVNNEELTDELLGCLAAELLALDEKDNNSCQKMANETDPENLNLVLRWRGSTPKEMGRETTKVKIQRHSSGLRIYDREEKFLISNEKKIFSENSLKSEEPILWTKGEILGKGAYGTVYCGLTSQGQLI |
Prediction | CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCSSCCCCCSSSSSSCCCCCCSC |
Confidence | 999875434211221344456664444566556668876677652110367666677765575445566111455445788887412333222221355687777520223201110012333466553113544664346765335210145677766510015665443345788755771345532544674014888765566542244457762100134467420223431246761220677420000014675310013334456666544567654556431332020313554215876114676419 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MKCPKTSFGIKQEHKVLISKEKSSKAVHSNLHDIENGDGISEPDWQIKSSGNEFLSSKDEIHPMNLAQTPEQSMKQNEFPPVSDLSIVEEVSMEESTGDRDISNNQILTTSLRDLQELEELHHQIPFIPSEDSWAVPSEKNSNKYVQQEKQNTASLSKVNASRILTNDLEFDSVSDHSKGTNSISQEIMDSVNNEELTDELLGCLAAELLALDEKDNNSCQKMANETDPENLNLVLRWRGSTPKEMGRETTKVKIQRHSSGLRIYDREEKFLISNEKKIFSENSLKSEEPILWTKGEILGKGAYGTVYCGLTSQGQLI |
Prediction | 863545634145445413556443432544355365563354442414346544135574143352253355345456326266153145133552366741454523343254145275235525122474324214555445434464353542753433430324042442466444334014401562675610440021025401514454553354346624463252235454542553655345242444443331244355323455443244542547420303313212421201000001442436 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCSSCCCCCSSSSSSCCCCCCSC MKCPKTSFGIKQEHKVLISKEKSSKAVHSNLHDIENGDGISEPDWQIKSSGNEFLSSKDEIHPMNLAQTPEQSMKQNEFPPVSDLSIVEEVSMEESTGDRDISNNQILTTSLRDLQELEELHHQIPFIPSEDSWAVPSEKNSNKYVQQEKQNTASLSKVNASRILTNDLEFDSVSDHSKGTNSISQEIMDSVNNEELTDELLGCLAAELLALDEKDNNSCQKMANETDPENLNLVLRWRGSTPKEMGRETTKVKIQRHSSGLRIYDREEKFLISNEKKIFSENSLKSEEPILWTKGEILGKGAYGTVYCGLTSQGQLI | |||||||||||||||||||
1 | 3greA | 0.04 | 0.04 | 2.08 | 0.80 | CEthreader | RSPNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS------KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSS | |||||||||||||
2 | 4ui9J | 0.06 | 0.06 | 2.53 | 0.80 | EigenThreader | VASLSREEPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDEKNLDVVVSLAERHYYNCDFKMCYKLTSDPFHASCLPVHIGTLVELNLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEAYGHSFAVESEAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRR | |||||||||||||
3 | 2xd8A | 0.08 | 0.08 | 2.98 | 0.36 | FFAS-3D | -ATDKYALYLKLFSGEMFKGFQHETIARDLVTKRT---LKNGKSLQFIYTGRMTSSFHTPGTPIL-GNADKAPPVAEKTIVMDDVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAA---AMDEKGVSSQGRCAVLNPRQYYALIQD------IGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGATGGVNNDYGTNAELGAKSCGLIFQKEAAGVQVQVTNGDVSVIYQGDVILGRMAMGA--DYLNPAAAV- | |||||||||||||
4 | 6zywY | 0.12 | 0.11 | 3.92 | 0.88 | SPARKS-K | EKIEKMKKRILWEPLGKQISDELPKNRIFVQTGRKSNYGFDIPQASYYMHELGLRIETQRLGWFILFFKE---MKEIQITQKMNHTWLIFKVDSNITFNSISKDTIALEFTGDALEQSFFKIKNYFEENQIKYEYQVDIPESQIAKKQILNNEQFFISYIESKQLMKDLKLSAYKAITPVENHIGVILVNGSYCSGK-----RKFAENLIRF-GSDNNLRLHLYKFD-------LNEMSELTEKSYLSGLLKFASEKKIQNDVIVASVPHFINTKILIDNINNIYSNFNKNPVNNFTYGVEGYSQFLL--LDTYNNYD | |||||||||||||
5 | 5nguA | 0.12 | 0.03 | 1.22 | 0.29 | CNFpred | -------------------------------------------------------------------------------------VAIKKISPF--------EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL------------------------------METDLYKLLKTQHSNDHICYFLYQILRGLKYIH--------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4o9xA | 0.02 | 0.02 | 1.29 | 0.67 | DEthreader | -------------ALTPTGPDGMGEGLAQRGEIGSDAQGLRYRSS-QFWLDEKAAA----LTTGQT--------------YARGYVEQTDSHQLAQGN---RTPPALYGLDNKHVPYRIASDPRPNLYPDTLHVYDPIGREIKVITAGWFR-RT-L--F-TPWFT--------TAAEVDPKLY-HRTTAGDPDTRITDPRLYEAKPNFESIDAGRTVVTGVIQT----------RQ--Y--ETSSLP-GRLLSVAEITEDTAGVTRLQSSSGDGRRMLKINATGLQWIRWLSSDPAGT------IDGLNLYRMVRNNP | |||||||||||||
7 | 3greA | 0.07 | 0.07 | 2.70 | 1.00 | MapAlign | ------------------ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKIN-------LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPFSDVFIPTQVTANLTMLLRKACDNSGLIG | |||||||||||||
8 | 2atyA | 0.08 | 0.08 | 3.08 | 0.78 | MUSTER | GSPPPILNGRISYYSTPIAVGTVIRSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVT-----ACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCTVPEVSSVFIFPPKPKDVLTITLTPK-VVVDISKDDPEVQFS------VDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTTDFFPEDITVEWQWGQPAENYKNTQPIMSYFVYSKLN | |||||||||||||
9 | 4ix3A1 | 0.24 | 0.03 | 1.08 | 0.72 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKARGGPKTLRRTPG-VEPKDIRVPGPLGSGNFGTVFRGVFKGDQDV | |||||||||||||
10 | 3dmkA | 0.05 | 0.05 | 2.27 | 0.62 | CEthreader | FDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIEN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |