Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CSSSSCCCCCCCCCCCCCCCCCHHHCCSSSSSSSCCCCCSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCSSSSCCCHHHHHHCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSSSSSSSCCCCCCCC QITGLDPAGPEYTRASVEERLDAGDALFVEAIHTDTDNLGIRIPVGHVDYFVNGGQDQPGCPTFFYAGYSYLICDHMRAVHLYISALENSCPLMAFPCASYKAFLAGRCLDCFNPFLLSCPRIGLVEQGGVKIEPLPKEVKVYLLTTSSAPYCM |
1 | 6e7kA | 0.42 | 0.40 | 11.64 | 1.33 | DEthreader | | RITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSGIQKPVGHVDIYPNGGTFQPGCNIGEA--DQLVKCSHERSIHLFIDSLLNENPSKAYRCSSKEAFEKGLCLSCRK--N-RCNNLGYEI----NKVRAKASSKMYLKTRSQMPYKV |
2 | 2pplA3 | 0.33 | 0.32 | 9.55 | 4.65 | SPARKS-K | | RITGLDPVEASFESTPEEVRLDPSDADFVDVIHTDAAGFGTNQQMGHLDFFPNGGESMPGCKKNALSQIVDVACNHLRSYKYYLESILNPDGFAAYPCTSYKSFESDKCFPCPDQ---GCPQMGHYADKF----AGREQQKFFLNTGEASNFAR |
3 | 6e7kA | 0.43 | 0.41 | 11.99 | 1.66 | MapAlign | | RITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRSIGIQKPVGHVDIYPNGGTFQPGCNIGEAGDVDQLKCSHERSIHLFIDSLLNENPSKAYRCSSKEAFEKGLCLSC---RKNRCNNLGYE------INKVRASSKMYLKTRSQMPYKV |
4 | 6e7kA | 0.41 | 0.40 | 11.65 | 1.52 | CEthreader | | RITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRSIGIQKPVGHVDIYPNGGTFQPGCNGEAGDVDQLVKCSHERSIHLFIDSLLNENPSKAYRCSSKEAFEKGLCLSCRK---NRCNNLGYE----INKVRAKASSKMYLKTRSQMPYKV |
5 | 2pvsB3 | 0.36 | 0.35 | 10.44 | 3.20 | MUSTER | | RITGLDPAGPCFQDEPEEVRLDPSDAVFVDVIHTDSSGFGMSQKVGHLDFFPNGGKEMPGCKGIWEGIGGFVSCNHLRSFEYYSSSVLNPDGFLGYPCASYDEFQESKCFPCPAE---GCPKMGHYADQFKGKTSA-VEQTFFLNTGESGQFTS |
6 | 2pplA | 0.33 | 0.32 | 9.55 | 3.76 | HHsearch | | RITGLDPVEASFESTPEEVRLDPSDADFVDVIHTDAAGFGTNQQMGHLDFFPNGGESMPGCKKNALSTRDFVACNHLRSYKYYLESILNPDGFAAYPCTSYKSFESDKCFPCPD---QGCPQMGHYADKF----AGREQQKFFLNTGEASNFAR |
7 | 2pvsB3 | 0.35 | 0.34 | 10.09 | 2.14 | FFAS-3D | | RITGLDPAGPCFQDEPEEVRLDPSDAVFVDVIHTDSSGFGMSQKVGHLDFFPNGGKEMPGCKKNWEGIGGFVSCNHLRSFEYYSSSVLNPDGFLGYPCASYDEFQESKCFPCPAEGCPKMGHYADQ----FKGKTSAVEQTFFLNTGESGQFTS |
8 | 1ethA3 | 0.34 | 0.33 | 9.92 | 1.48 | EigenThreader | | RITGLDPAEPCFQGTPELVRLDPSDAKFVDVIHTDAAGFGMSQTVGHLDFFPNGGKQMPGCQGIWEGTRDFVACNHLRSYKYYADSILNPDGFAGFPCDSYNVFTANKCFPCPS---EGCPQMGHYA-DRFPGKTNGVSQVFYLNTGDASNFAR |
9 | 1gplA | 0.38 | 0.36 | 10.57 | 3.56 | CNFpred | | RITGLDPAEPYFQDTPEEVRLDPSDAKFVDVIHTDISGFGMSQKVGHMDFFPNGGKDMPGCKTGI-------SCNHHRSIEYYHSSILNPEGFLGYPCASYDEFQESGCFPCPA---KGCPKMGHFADQYPGKTN-AVEQTFFLNTGASDNFTR |
10 | 6e7kA1 | 0.42 | 0.40 | 11.63 | 1.33 | DEthreader | | RITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSGIQKPVGHVDIYPNGGTFQPGCNIGEA--DQLVKCSHERSIHLFIDSLLNENPSKAYRCSSKEAFEKGLCLSCRK--N-RCNNLGYEI----NKVRAKASSKMYLKTRSQMPYK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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