>Q4VX62 (202 residues) MNAAVPPEQAHSCGWGTEGCPCLRSTAIRQTFFPGGDQFQRDGGLAMLPILVSKFLASSD PPVSVPEMLGLQNRWRGMKNEEHCPGSFFLCKIRECVLNYRFQLQHPGFQHYLQSSGRRD RGRSEDKKPLEAGVWCWDRGGWDGSSRAVHLLFRGVAHPSLYLFPREDPPRLLFPRLSLL VCEQFWCYSATLLLAPLPASTC |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MNAAVPPEQAHSCGWGTEGCPCLRSTAIRQTFFPGGDQFQRDGGLAMLPILVSKFLASSDPPVSVPEMLGLQNRWRGMKNEEHCPGSFFLCKIRECVLNYRFQLQHPGFQHYLQSSGRRDRGRSEDKKPLEAGVWCWDRGGWDGSSRAVHLLFRGVAHPSLYLFPREDPPRLLFPRLSLLVCEQFWCYSATLLLAPLPASTC |
Prediction | CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHSCCCCCCCCCCCCSSHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCSSSSSHHHHHHHHSSSSCCCCHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC |
Confidence | 9988983343356888888740234445551068963112258712028999988613799977167743145650355656799735532057775541134239658899874177545765567853144268635887762268899883146860454148999710013668888776656556553135887789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MNAAVPPEQAHSCGWGTEGCPCLRSTAIRQTFFPGGDQFQRDGGLAMLPILVSKFLASSDPPVSVPEMLGLQNRWRGMKNEEHCPGSFFLCKIRECVLNYRFQLQHPGFQHYLQSSGRRDRGRSEDKKPLEAGVWCWDRGGWDGSSRAVHLLFRGVAHPSLYLFPREDPPRLLFPRLSLLVCEQFWCYSATLLLAPLPASTC |
Prediction | 8745243740451322361030034332442214335414552000101100231135563324134213145304425556303111000303500241313153430432155545555446654521510100023231534430020003213322010124742131013301110033110220100002134658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHSCCCCCCCCCCCCSSHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCSSSSSHHHHHHHHSSSSCCCCHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCHHHHHHHHHCCCCCCSSSCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC MNAAVPPEQAHSCGWGTEGCPCLRSTAIRQTFFPGGDQFQRDGGLAMLPILVSKFLASSDPPVSVPEMLGLQNRWRGMKNEEHCPGSFFLCKIRECVLNYRFQLQHPGFQHYLQSSGRRDRGRSEDKKPLEAGVWCWDRGGWDGSSRAVHLLFRGVAHPSLYLFPREDPPRLLFPRLSLLVCEQFWCYSATLLLAPLPASTC | |||||||||||||||||||
1 | 4a7kA | 0.07 | 0.07 | 2.87 | 0.56 | CEthreader | QSSSWTPVPLAKLDFPVAMHYADITKNGFNDVIITDQYGSSMDDIWAYGGRVSWLENPGELRDNWTMRTIGHSPGMHRLKAGHFTRTDRVQVVAVPIVVASSDLTTPADVIIFTAPDDPRSEQLVGTRHLVHEVAIVPAAETDGEMRFDQIILAGRDGVDCLWYDGARWQRHLVGTGLPEERGDPYWGAGSAAVGRVGDDYA | |||||||||||||
2 | 5b4xB | 0.05 | 0.04 | 2.10 | 0.57 | EigenThreader | RCDEDDD--CLDHSDEDDCPKKTCADSDFTCDNGHEEECPDGSDESEA-------TCTNECLHNNGGCSHICTDLKIGFECTCPAGFLIFTNVVAL----DVEVATNRI-YWCDLSYRDKASDPKEQLHSPEGLAVDWVHK------HIYWTDSGNKTISVATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMWSDWGDQAKI | |||||||||||||
3 | 5zakA5 | 0.16 | 0.11 | 3.63 | 0.30 | FFAS-3D | -------------TLGPN--PGLILQALTLSNASDGFNLERLEGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNC-------------------NLYRLGKKKGLPSRMVVSIFDPPVEQCIADKSIADCVEALLGCYSCGERAAQLFLCSLGLKVLPVIKRTDREKAL----------------------------- | |||||||||||||
4 | 2a5zC | 0.10 | 0.10 | 3.65 | 0.56 | SPARKS-K | LTTSIATSDFYSYDFHSIGLTSANNISLLSTGISLQNILSEGNHFGVQPIVSSSFLAGLA---IFPKESELEVTVYFKTPSAFNPAQLTVIGSTSIGISDRSGLIIENGNAFGGIVKASAATETGSTYALSTSTWYICKFKLTDDR--FKVTLYSDSGTQLYSYTSTAAFRADAHIGFKTQCKTISIDLIEFKAKVSATRAK | |||||||||||||
5 | 4fnqA | 0.07 | 0.03 | 1.21 | 0.69 | CNFpred | ---------------------------------------------------------------------------------------NPFIALVAKNADEHQG---EVYGFSFVYS----------------GNFLAQVEVD---FHTARVSMGINP-FTWLLQPG---ESFQTPEVVMVYSDQGLNGMSQTYHEL------ | |||||||||||||
6 | 1lfwA | 0.08 | 0.06 | 2.50 | 0.67 | DEthreader | DSSEDGPVDAMTKFLSKFDTENFANYA-G----------RVNFRLGIIG-H-MDVVPADPFYGRGSADGPSLTAYYGMLPKKIDPDIVFSPDAINHAAPQVGFYHHMGDLARYPQTDPDTMIKVVTYNGFEEPHYVPGVQLKEKPGHEVVIGGT--------A----PENGPMVMHA----------IYA------------ | |||||||||||||
7 | 2pffB | 0.09 | 0.09 | 3.37 | 0.89 | MapAlign | ----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
8 | 5kouA | 0.14 | 0.12 | 4.26 | 0.35 | MUSTER | VGSIMSPNSADRQVWKTLTAPGTNSNDNLVKIAHDLGHYLIMQ--GFMHIKTVEWYTPSRDPTPIAGMSVMVNITKFMKQFKN-NNRHQITSIFLIKPLADFKVQCYMSYFKRESHDNDGVANLTVRSMTSPETIRFQVGEW-----LTSTTLKENNLPEGWVWDRVE----LKSDTPYYA-----DQALTYFITPPPVDSQ | |||||||||||||
9 | 6ainA2 | 0.15 | 0.05 | 1.84 | 0.37 | HHsearch | -------------------------------------------------------------------------------------WSE---RLVATNVFYDFSL--HG---------------------YSRANFVHDPVDWAVVVQ--------LDKTGLW--------RVCYGEDPDISEAEVRRRLPERFKRLLPGAQY | |||||||||||||
10 | 1bhyA2 | 0.09 | 0.04 | 1.53 | 0.54 | CEthreader | ---------------------------------------------------------------------------DARVIPGVAYTSPEVAWVGET----------------------ELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRI------------IGGGIVGPNGGDMIGEVYLAIEMGCDA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |