>Q4KMG0 (130 residues) SSFPVKVHPSAVESAPEKNASGISVPDAPIILSPPQTHTPDTYNLVWRAGKDGGLPINAY FVKYRKLDDGVGMLGSWHTVRVPGSENELHLAELEPSSLYEVLMVARSAAGEGQPAMLTF RTSKEKTASS |
Sequence |
20 40 60 80 100 120 | | | | | | SSFPVKVHPSAVESAPEKNASGISVPDAPIILSPPQTHTPDTYNLVWRAGKDGGLPINAYFVKYRKLDDGVGMLGSWHTVRVPGSENELHLAELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKEKTASS |
Prediction | CCCCCSSCCCCCCCCCSSCCCCCCCCCCCCCCCCCSSCCCCSSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSSSCCCCCSSSSCCCCCCCSSSSSSSSSSCCCCCCCSCSSSSCCCCCCCCC |
Confidence | 9865111388641230513678889989945555253579889999778998998621799999987899865443799984388559998599999199999999917750898333997489999999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | SSFPVKVHPSAVESAPEKNASGISVPDAPIILSPPQTHTPDTYNLVWRAGKDGGLPINAYFVKYRKLDDGVGMLGSWHTVRVPGSENELHLAELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKEKTASS |
Prediction | 8544354455334234346566553452344244454454320303242375451403312031242656554444144151437434140563424344342121214334343143314147655478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCSSCCCCCCCCCSSCCCCCCCCCCCCCCCCCSSCCCCSSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSSSCCCCCSSSSCCCCCCCSSSSSSSSSSCCCCCCCSCSSSSCCCCCCCCC SSFPVKVHPSAVESAPEKNASGISVPDAPIILSPPQTHTPDTYNLVWRAGKDGGLPINAYFVKYRKLDDGVGMLGSWHTVRVPGSENELHLAELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKEKTASS | |||||||||||||||||||
1 | 5utkA | 0.18 | 0.16 | 5.27 | 1.33 | DEthreader | QYLEPIGLPPPRLNLLPKSQTPDILPPQPENIKIS-NITHSSA-ISWTI-L-DGYSISSITIRYKVQ---G-NEDQHVDVKIKATITQYQLKGLEPETAYQVDIFAENNIGSSNPAFSHLVTLP-ES--- | |||||||||||||
2 | 2vkxE2 | 0.29 | 0.22 | 6.55 | 1.33 | SPARKS-K | ----------------------VREPSAPK-LEGQRGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPE-----IRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAA------ | |||||||||||||
3 | 2jllA | 0.26 | 0.19 | 5.94 | 0.47 | MapAlign | ----------------------ADVPSSPYGVKIIELS-QTTAKVSFNKPDSGGVPIHHYQVDVKEVA-----SEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSIEIFQTLPV----- | |||||||||||||
4 | 1wfnA | 0.17 | 0.15 | 5.05 | 0.30 | CEthreader | --------GSSGSSGPQLVRTHEDVPGPVGHLSFSEIL-DTSLKVSWQEPGEKNGILTGYRISWEEYNR----TNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPSGPS | |||||||||||||
5 | 1x4zA | 0.24 | 0.22 | 6.73 | 1.29 | MUSTER | --------GSSGSSGSQPDHGRLSPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWI--LATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSASRPYVVSGSGPSS | |||||||||||||
6 | 4bk4A | 0.19 | 0.18 | 5.94 | 0.91 | HHsearch | YTFEIWAVNGVSKYVSVTVTTNQAAPSSIALVQ-AKEVTRYSVALAWLEPDRPNGVILEYEVKYYEKDQN---ERSYRIV--RTAARNTDIKGLNPLTSYVFHVRARTAAGYGDFSPLEVTTNTVPSRII | |||||||||||||
7 | 2ed7A | 0.21 | 0.19 | 6.09 | 1.68 | FFAS-3D | --------GSSGSSGKPAIPSSSVLPSAPRDVVPVL-VSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRER----ALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQIKVATQPESGPSS | |||||||||||||
8 | 2ed9A | 0.17 | 0.15 | 5.05 | 0.53 | EigenThreader | GSSGSSGNRYGPGVST---DTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPTQNGFITGYKIRHRKT-----TRRGEMETLE-PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSWYTAETPEN----- | |||||||||||||
9 | 2v5yA | 0.21 | 0.21 | 6.58 | 1.62 | CNFpred | TNVSVKLILMRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSS--DLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSM- | |||||||||||||
10 | 1fnfA | 0.17 | 0.14 | 4.55 | 1.17 | DEthreader | ------------------QQGNSPAVPPPTDLRFT-NIGPDTMRVTWAPPP-S-IDLTNFLVRYSPVK----NEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPVLI | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |