Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660
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| SS Seq | CCCCHCHHHHHHHHSSSSSSSSCCCCCCCSSSSCCCCSSSSCCCCSSSSSSSSCCCCSSSSSSCCSSCCCCCCSSSSSCCSSSSCCCCCCCCSSSSSSSSSCCCCSSSSSSSSSSCCCCCCCCCCCCCSSSSCCCCSSSSSSCCCCCCCCSSSSSSCCSSCCCCCCCSSSCCCCSSSSCCCCHHHCSSSSSSSSSCCCCCSSSSSSSSSSSSCCCCCCCCCSCCCCCCCCSSSSCCCCSSSSSSSSSSCCCSSSSSSCCSSCCCCCCSSSSCCSSSSCCCCCCCCSSSSSSSSSCCCCSSSSSSSSSSCCCCCCCCCCCCCSSCCCCCCSSSSSCCSCCCSSSSSSCCCSSSSSSCSSSSSSSSSSSSSSSSSSSSSCCCCCCCCCCCCSSSSCCCCCCCSSSSSSCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCSSCCCCCCCSSCCCCCCCCCCCCCCCHHHSSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC MHPDLGPLCTLLYVTLTILCSSVSSDLAPYFTSEPLSAVQKLGGPVVLHCSAQPVTTRISWLHNGKTLDGNLEHVKIHQGTLTILSLNSSLLGYYQCLANNSIGAIVSGPATVSVAVLGDFGSSTKHVITAEEKSAGFIGCRVPESNPKAEVRYKIRGKWLEHSTENYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHQLKVEPIGRKLLVSRPSSDDVHILHPTHSQALAVLSRSPVTLECVVSGVPAPQVYWLKDGQDIAPGSNWRRLYSHLATDSVDPADSGNYSCMAGNKSGDVKYVTYMVNVTKVKRVPGASEYPVKDLSTPPNSLGSGGNVGPATSPARSSDMLYLIVGCVLGVMVLILMVFIAMCLWKNRQQNTIQKYDPPGYLYQGSDMNGQMVDYTTLSGASQINGNVHGGFLTNGGLSSGYSHLHHKVPNAVNGIVNGSLNGGLYSGHSNSLTRTHVDFEHPHHLVNGGGMYTAVPQIDPLECVNCRNCRNNNRCFTKTNSTFSSSPPPVVPVVAPYPQDGLEMKPLSHVKVPVCLTSAVPDCGQLPEESVKDNVEPVPTQRTCCQDIVNDVSSDGSEDPAEFSRGQEGMINLRIPDHLQLAKSCVWEGDSCAHSETEINIVSWNALILPPVPEGCAEKTMWSPPGIPLDSPTEVLQQPRET |
1 | 3b43A | 0.15 | 0.10 | 3.51 | 1.08 | EigenThreader | | ------------------------AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNLVINKVDH---SYTCKAENS--VGAVAS--SAVLVIKERKLPPKLKDVHETLGFPVAFECRIS---EPLQVSWYKDGELLKDDANTSFIHNVATLQILQTDQSHVGQYNCSASNL--GTASSSAK---LTLSEHEVPPFFDLKPVSVDLAL---GESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVELTVLKVTKGDAGQYTCYASNA--GKDSCSAQLGVQEPPKKLEPSRIVKQDESPEIE----------------------------------------------------TEI-----------QESSKFRMSFVES---------------------------------VLEMYNL----SVEDSAAGSASSSTSLK---VKE--PPVFR--KKPHPVETLKGAQGTPPFQVSWHKDKRELRSGKKLTSIHILNVDSADASNDVGITLKAPPVKKLSDIS--------------TVVGEEVQL----QATAEPISVAWFKDVRESDNIWISYSEN---IATLQFSRAEPANAGKYT--CQIKNE--------AGCFATLSVLE----------------- |
2 | 3b43A | 0.15 | 0.12 | 4.05 | 1.28 | FFAS-3D | | --------------------------EPPYFIEPLEHVEAAIGEPITLQCKVDGPEIRIAWYKEHTKLRSAPAYKMQFKNSLVINKVDHSDVGEYTCKAENSVGAVASS-AVLVIKERKLPPARKLKDVHETLGFPVAFECRIN-GSEPLQVSWYKDGELLKDDANLQTSFNVATLQILQTDQSHVGQYNCSASNPLGTASSSA----KLTLSEHEVPPFFDLKPVSVD---LALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEI-------------------------QESSKFRMSFVESVEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPV--ETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKL----SDISTVVGEEVQL-QATIEGAEPISVKDKGEIVRESDNIWISYSENIAQFSRA---EPANAGKYTKNEAGTATLSVLE----------------------------------------------------------------- |
3 | 1e07A | 0.15 | 0.12 | 4.21 | 1.58 | SPARKS-K | | -----------------------------KLTIESTPFNVAEGKEVLLLVHNLPQHLGYSWYKGEQATPGPAYSGREIIYSLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPEPKPSISSNNSKPVEDKDAVAFTCEPE--TQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSAR----RSDSVILNVLYGPDAP----TISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE-------LFIPNITVNNSGSYTCQAHNSDTGLRTTVTTITV---YAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNN-----------------------QSLPVSPRLQLSNDNRTTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPLIDGNIQQHTQE-LFISNITEKNSGLYTCQANNSASGHS--------------RTTVKTITSAELPKPSISSN----NSKPVEDKDAVAFTCEPEAQNTTGQSLPVSPRLQLS--NGNRTLTLFNVTR------NDARAYVVSANRSDPVTLDVLYGPDTPIISPPDSSYL-SGANLNLSCHSASNPSP------QYSWRINGIPQQHTQVLFITPNNN |
4 | 2rikA | 0.23 | 0.09 | 2.93 | 3.06 | CNFpred | | -------------------------MAPPFFDLKPVSVDLALGESGTFKCHVTGTPIKITWAKDNREIRPGNYKMTLVTATLTVLKVTKGDAGQYTCYASNVAGK-DSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGG-SPEIKVLWYKDETEIQESSKFRMSFSVAVLEMYNLSVEDSGDYTCEAHNA-AGSASSST---SLKVKEP----PVFRK--KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMLTSIHILNVDSADIGEYQCKASNDVGS-YTCVGSITLKA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1e07A | 0.15 | 0.13 | 4.32 | 1.36 | MUSTER | | -----------------------------KLTIESTPFNVAEGKEVLLLVHNLPQHFGYSWYKGERVDGNRQIIGYVPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPLPKPSISSNNSKPVEDKDAVAFTCEPET--QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARR---SDSVILNVLYGPDA-----PTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE-------LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTVYAEPPKFITSNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTL------------LSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH-TQELFISNITEKN-------SGLYT---------------CQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLVNGQSLPVSPRLQLSNGNRT--TLFNVTRNDARAGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSG-ANLNLSCHSASNPSP------QYSWRINGIPQQHTQVFIAKITPN |
6 | 5oj2A | 0.16 | 0.13 | 4.25 | 1.23 | FFAS-3D | | ----------------------------------ERVYTIREGDTLVLQCLVTGPRPQVRWTKTATSV---------LNETLRIEKIQRLQGGRYYCKAENGVGVPAIKSIRVDVQYLDEPVLTVHQTISDVREKTVFLRCTVN-SNPPARFIWKRGAETLNGVDIYEPLGETKVLKLKNLRPQDYASYTCQVSVRNVCS----IPDKSITFQLTNTTAPPALKLSVNETLVVNPGDNVTQCSLTGGDPQPEVLWSHSPGPL--PPNSLVQGGNLTIWRIRVEDSGYYNCTAINNVGNPAKKTVNLLVRSKNADVIKESETIQLGQDLKLSCHVDAVPQEKVVYS------------------------------WYKNGKPARFSDRLLITRNDPELPPVTCSLEIIDLRFSDYGT------------YLC----------------VATFQGAPIPDLSVEVNISSETVPPTISVPKGQSTITVREGSRAEL----------QC------EVRGKPKPPI----IWSRVDKETPPSGTTVETLRLESVSRDSGTYKCQTARYNGFNIRPREALVQLNVQFPPVVEPAFQDVRQGGRSVTLRCTLKGS-PKVATSVWNGTLLAQQDYSELKVD----SVSRETSGSYECSISNDVGVSKAYSPEFYYDTPN- |
7 | 6iaaA | 0.15 | 0.14 | 4.64 | 1.51 | SPARKS-K | | -------------------SRLRQEDFPPRIVEHPSDVIVSKGEPTTLNCKAERPTPTIEWYKDGERVDKDDPRSHRLSGSLFFLRIVKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIR-GGKL-ISNTRKSDAG-YTCVGTNVGE--------------RDSDPAELTVFERRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKDDADLPRGRYDIKDDYTLRIKKT-STDEGTY-CIAENRVGKEASATLTVRAPPQFVVRPRDQIVAQGRTVTFPCETKGNPQPAEGSQNLLFPN-------------------------QPQQPNSRCSVSPTGDLTIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTTSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTDVTKYIIEAFSQSVSNSWQTVTTLYTVRGLRPNTIYLFVRAINPQGLSDPSPSDPVRTQDISPPAQGVDHRQVQKELGDVLVRLHNPVVLTPTTVQVTWTVYRVYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKK |
8 | 2rjmA | 0.23 | 0.09 | 2.93 | 3.05 | CNFpred | | -------------------------MAPPFFDLKPVSVDLALGESGTFKCHVTGTPIKITWAKDNREIRPGNYKMTLVTATLTVLKVTKGDAGQYTCYASNVAGK-DSCSAQLGVQAPPRFIKKLEPSRIVKQDEHTRYECKIGG-SPEIKVLWYKDETEIQESSKFRMSFSVAVLEMYNLSVEDSGDYTCEAHNA-AGSASSST---SLKVKEP----PVFRK--KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMLTSIHILNVDSADIGEYQCKASNDVGS-YTCVGSITLKA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3b43A | 0.17 | 0.13 | 4.41 | 1.28 | MUSTER | | ------------------------AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPIRIAWYKEHTKLRSAPAYKMQFKASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKRKLPPSFARKLKDVHETLGFPVAFECRIN-GSEPLQVSWYKDGELLKDDANTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSA----KLTLSEHEVP---PFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEM----------YNLSVEDSGDYTCEAHNAAGSASSSTSLKEPPVFRKKPHPVETLKGDVHLECELQGTPPFDKRE-LRSGKKYKIMSENFLTSIHILNVDSAD-------IGEYQCKAS--------------NDVGSDTCVGSITLKAPPRFVKKLSDIS-----TVVGEEVQLQATIEGAEPISVA----FKDKGEIVRESDNIWISYSENIASRAEPANA-KNEAGTQECFATLSVLE--------------------------------------------------------------- |
10 | 1e07A | 0.14 | 0.12 | 4.04 | 1.22 | FFAS-3D | | -----------------------------KLTIESTPFNVAEGKEVLLLVHNLPHLFGYSWYKGERVDGNRQIIGYVPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPEPKPSISSNNSKPVEDKDAVAFTCEPETQDAT--YLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPL--------NTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE-------LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDACEPEIQNTTYLWWVNNQS----------------------------LPVSPRLQLSNDNLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSY--TYYRPGVNLSLSCHAASNPPAQIDGNIQQHTQELFISNITEKNSGLYT---------------------C-QANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVETCEPEAQNSLPVSPRLQLSNGLFNVTRNDARCG-IQNSVSANRSDPDSSYLSGANLNLSCHSPS-----PQYSWRINGIPQQHTQVLFIA----KITPNNNGTYACFVSNLAT--GRNNSIVKS----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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