>Q4G0X4 (260 residues) MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYIL NFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRV QTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQD PNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDS SHPHALDFMNNKIIRLIRYR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDSSHPHALDFMNNKIIRLIRYR |
Prediction | CCCSSSSSSCCSSSSSSHHHHHHCCCCHHHHHHCCCCCCCCCCCCCSSSCCCHHHHHHHHHHHHCCCSCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSSSSSSSSCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSCCCCHHHCCCCHHHHHHHHHHHHHCCCSSSSCCCCSSSSCCSSSSSSSCC |
Confidence | 99569998499899986889965998502122136565667777418972992499999999806963379986159999999998099689999998766553433445421321222431002434465699986787110024457888888996202788627998566765557875344543233443430366331123578727741213651349999998786467356532783468711799998529 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDSSHPHALDFMNNKIIRLIRYR |
Prediction | 86440301012331302230044234120032244314124234120001121600200020013240211762541630250052160650153046244634655454236244534242041236332301102233333110301010001010322201203343154144415514233031214245144240334102200222453402513312120030015303302232443320311211312438 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCSSSSSSCCSSSSSSHHHHHHCCCCHHHHHHCCCCCCCCCCCCCSSSCCCHHHHHHHHHHHHCCCSCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSSSSSSSSCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSCCCCHHHCCCCHHHHHHHHHHHHHCCCSSSSCCCCSSSSCCSSSSSSSCC MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDSSHPHALDFMNNKIIRLIRYR | |||||||||||||||||||
1 | 3p8cB | 0.05 | 0.04 | 1.84 | 0.83 | DEthreader | FFTYLIITTILLP-LSALSLQMVYPNLDMEKWIIF--FILCHGIL-WLCLSLFRDEV----FM-LSFARD---IIWLLRHADN-MP------FI-DKHIAELFQQCLESMKQARNTHIRFTKSIVGTQTITSLYTNLLESLMWHISSQVAELKKLVVNVLTQMRTSF-DKPQMAALFK-RLSSVDLFVALAINQA--SIEDRLKEFALASSLLKIGTRESVYLLL--------------M--VQESPFL----------- | |||||||||||||
2 | 6s4lA | 0.31 | 0.23 | 7.10 | 2.00 | SPARKS-K | SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPIVLDSKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETG-------RFSRPCECLVVRVAPDL--------GERITLSGDK-----SLIEEVFPEIG---DVMSTHVRFPLNGYCHLN--------------------------------------SVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRREL | |||||||||||||
3 | 6s4lA | 0.31 | 0.24 | 7.21 | 1.34 | MapAlign | SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPIVLDSLKHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRET-------------------------------GRFSRPCECLVVRVA-------PDLGERITLSGDKSLIEEVFPEIGDVMSTHVIRFP----------------------LNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRREL | |||||||||||||
4 | 6s4lA | 0.31 | 0.24 | 7.21 | 1.16 | CEthreader | SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPIVLDSKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFS-------------------------------RPCECLVVR-----VAPDLGERITLSGDKSLIEEVFPEIGDVMST-------------------HVIRFPLNGYCHLN-----SVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRREL | |||||||||||||
5 | 2r9rB | 0.20 | 0.20 | 6.27 | 1.27 | MUSTER | -SERVVINISGLRFETQLKTLAQFPETLLGDPKK-RMRYFDPLRNEYFFDRNRPSFDAILYYYQSGRLRRPVNVP-LDIFSEEIRFYELGEAMEMFREDEGYIKEEERP---LPENEFQRQV--WLLFEYPRIIAIVSVMVILISIVSFCLEPIFRDENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFTNIMNIIDIVAIIPYYVTIFLTESNKSVLQFQNVRIFKLSRHS | |||||||||||||
6 | 6s4lA | 0.30 | 0.25 | 7.46 | 3.86 | HHsearch | SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPIVLDSKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRET--G-R---FSRPCECLV--VR--VAPDL----------GERITLSGDKSLIEEFPEIGD----VMSHVIRFPLNGYCHLN-----SVQVL-----ERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIRIKQ-------------- | |||||||||||||
7 | 6s4lA | 0.31 | 0.23 | 7.09 | 1.78 | FFAS-3D | -NAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPILDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERW------KQDRETGRFSRPCECLVVRVAPDLGERITLSGD----------KSLIEEVF-----------------------------------------PEIGDVMSTHVIRFPLNGYCHL---NSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRR-- | |||||||||||||
8 | 6s4lA | 0.24 | 0.18 | 5.63 | 0.82 | EigenThreader | SMSNAHIDVGGHMYTSSLATLTKYPESRIGRLFDGTDPIVLDSLKQHYFIDRDGQFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETG------RFSRPCECLVVRVAPDLG--ERITLSGD---KSLIEEVF-----------------------------------------PEIGD------VMSTIRFPLNGYCHLN---SVQVLERLQQRGFEIVGSCGDSS----QFSEYVLRREL | |||||||||||||
9 | 5wieB | 0.22 | 0.13 | 4.01 | 1.51 | CNFpred | SSERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPL-RNEYFFDRNRPSFDAILYYYQSGRLRRPVNV-PLDIFSEEIRFYELGEAMEMFREDEGYIKEEERPLPEN-----EFQRQVWLLFEYARIIAIVSVMVILISIVSFCLLPIFRDEN----------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 5yfpC | 0.07 | 0.06 | 2.36 | 0.83 | DEthreader | VAERVAELAEDAETPLEIHFLLSA---------------------DGYDIVEMARQIFKDGYKHFLINGNSEGIFLIIVKEHIANC--CPPHW-NIFEVYFDYQDKSVIGD-KEVAGTNQILVGVVERFSDLATDGFAEVAQCSSLGLITLMFDDLRKPYQ-E-IFS-KTWYMGSQAQ--QIADTLETIIKFL-TAL--SF--EHSF-FLEAMKRDFE---IF-YQLFVKVLDGNSKL-Q--DREPTLMRRF-------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |