Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCSSCCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCCCSCCCCCCSCCCCCCCCCSCCCCCCCCCCSCCCCCCCSSCCCCCHHHSSSSCCCCCCCCCCCCCCSCCCCCCSCCCCCCCHHHCCCCCCCCCCCCCCCCCSSCCCCCCSCCCCCCHHHSSCCSCCCCCSSCCCCCCSCCCCCCHHHSCCCSCCCCCSCCCCCCCSSCCCCCHHHHCCCSCCCCCSSCCCCCCSCCCCCCCCCSSCCSCCCCCSCCCCCCCSCCCCCCCHHHSCCCCCCCCCCCCCCCCSSCCCCCHHHHCCCSCCCCCSCCCCCCCSCCCCCCCCCSSCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCSSCCSCCCCCCCCCC MFATSGAVAAGKPYSCSECGKSFCYSSVLLRHERAHGGDGRFRCLECGERCARAADLRAHRRTHAGQTLYICSECGQSFRHSGRLDLHLGAHRQRCRTCPCRTCGRRFPHLPALLLHRRRQHLPERPRRCPLCARTFRQSALLFHQARAHPLGTTSDPAAPPHRCAQCPRAFRSGAGLRSHARIHVSRSPTRPRVSDAHQCGVCGKCFGKSSTLTRHLQTHSGEKPFKCPECGKGFLESATLVRHQRTHTGEKPYACGDCGRCFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLVVHQRIHTGEKPFACPECGRRFSDRSDLTKHRRTHTGEKPYRCELCGKRFTCVSNLNVHRRNHAGHKPHKCPECSKAFSVASKLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARTAAAVAIQSAVGTALVFEGPAEQEKPGFSVS |
1 | 3ugmA | 0.05 | 0.03 | 1.56 | 0.67 | DEthreader | | ---LALGTV----------------HED--G----------------------GQLVKI--------VHASRNALPLNLQVVAIAKQALETVQRL-KQLET--RLL-----IGGKQALETVQRLLPVLCGLTPDQVVAIASHGGG--------------------PDQ---I-ASHDGGK-ALE--T--V--Q-RLLPVLCQAHGLTQVLETVQRLLPVLCQAHVQLVLCAHGLPVVAGKALETVQLLPLLVIALV-L-QVAIASNIGSNGGSNGGGSNGDGQATVAIASNGGGQASNNGGKQALVVIALTVLPCLPVVASGKQALETVQRLLPVLLEQRLLPVLCVVASIGGKQALETVQRLVLETVLVLLLVVIASNGGKQALVQVVAIASN--------S------------------------------------------------- |
2 | 5v3jE | 0.41 | 0.25 | 7.42 | 1.18 | CEthreader | | -------------------------------------------------------------------------------------------------PHKCKECGKAFHT-PSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVH-------TDEKCFECKECGKAFMRPSHLLRHQRIHTGEKP--------HKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------------------------------------- |
3 | 5v3jE | 0.40 | 0.25 | 7.24 | 1.40 | EigenThreader | | ------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTG-----------------------------------------------------------------------------------------------------EKPHKCKECGKAFRYDTQLSLHLL--THAGARRFKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------------------------------------- |
4 | 5v3jE | 0.45 | 0.28 | 8.14 | 3.09 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHV-------GEKPYKCQECGKAFPSNAQLSLHHRVHTDEKC--------FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------- |
5 | 1vt4I3 | 0.07 | 0.06 | 2.60 | 1.47 | MapAlign | | -----LHRSIVDHYYFYSHIGHLIEHPERMTLFVFERLVNAIFLRIALMAEAIFEEAHKQVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------- |
6 | 5v3jE | 0.45 | 0.28 | 8.14 | 2.65 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLH-------VGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKC--------FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------- |
7 | 4c2mB | 0.07 | 0.07 | 2.83 | 1.39 | MapAlign | | -LGNKLSVSVEQVSIASYRGKLLKLKRDCGGLPVRRNHPMAIIFASYSHYGIQITNV--LHYLNDGQVTFRFSWREYLVPVVMILELLLRGFQVLQYLGDRVVFQADLEVGQEVLDRKLLPESWGFLCTPDGSPCNHFAHPSILYSLGVAPASHTFAAGPSLCCVQIDIGWVS-HEQGKIIADTLKVEGKTPGLPIDLEIGYVPLYLFGKEDIVGPFEQVY--MNIAVTPQEIQHTHVEPRNMYQCQMGKQTMGTPSDNKLYRLFPNGFGMYKTDPITQHFGFLPYIDPICAYFTKIKVSIRRTPQIGDKFSSRHGQKGVCHAFPSRMTMFVE--SLAGAGALHGIAQPA-DYFGEQLAKAFQVRGPVNSLTMQPVGGSFLLQDDVCCGSILTTQQSVPISTVCCRRCSMRFWEFVGGNETTTVAIPFVLKYLDSELSAMGIRLRYNVEPK- |
8 | 5v3jE | 0.45 | 0.28 | 8.14 | 2.72 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHV-------GEKPYKCQECGKAFPSNAQLSLHHRVHTDEKC--------FECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------- |
9 | 5undA | 0.29 | 0.11 | 3.30 | 1.71 | MUSTER | | ----------EKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEVAKFHCPHCDTVIARKSDLGVHLRKQHSIEQGKKCRYCDAVFHERYALIQHQKSHK-------NEKRFKCDQCDYACRQERHMIMHKRTHT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5v3mC | 0.45 | 0.28 | 8.14 | 12.06 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHV-------GEKPYKCQECGKAFPSNAQLSLHHRVHTDE--------KCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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