Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
| | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCSSSHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCSSSSSSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCSSSSSSCCCCCCCCCCHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCSSSCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHCCC MAAGPIRVVLVLLGVLSVCAASGHGSVAEREAGGEAEWAEPWDGAVFRPPSALGAVGVTRSSGTPRPGREEAGDLPVLLWWSPGLFPHFPGDSERIECARGACVASRNRRALRDSRTRALLFYGTDFRASAAPLPRLAHQSWALLHEESPLNNFLLSHGPGIRLFNLTSTFSRHSDYPLSLQWLPGTAYLRRPVPPPMERAEWRRRGYAPLLYLQSHCDVPADRDRYVRELMRHIPVDSYGKCLQNRELPTARLQDTATATTEDPELLAFLSRYKFHLALENAICNDYMTEKLWRPMHLGAVPVYRGSPSVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEEYMKYLAYKQPGGITNQFLLDSLKHREWGVNDPLLPNYLNGFECFVCDYELARLDAEKAHAASPGDSPVFEPHIAQPSHMDCPVPTPGFGNVEEIPENDSWKEMWLQDYWQGLDQGEALTAMIHNNETEQTKFWDYLHEIFMKRQHL |
1 | 2nzxC | 0.17 | 0.11 | 3.53 | 1.81 | SPARKS-K | | ---------------------------------------------------MFQPLLDAYVESASIEKMASKSPPPLKIAVANWW-----GDEEIKEFKNQRYTITLHQNPNEFSD-----LVFGNPLGSARKILSYQNAKRVFYTGEN--------ESPNFNLFDYAIGFDELRYLRMPLYTAPYKLKALKKPSHCPNLCAVVNLKRGFASFVASNPNAP-IRNAFYDALNSIEPVTGGGSVRNT-------------LGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP-KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYEN--PLNTLAYFYQNLS------------------FKKILAFFKTILENDTIYHDNPF---------------------------------------------------------------------------------- |
2 | 5zibA | 0.06 | 0.05 | 2.30 | 1.24 | MapAlign | | DYGVDGSTCSFFIYLSEWCPHLLAEIRTDFNILYSMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKVLVHLGLELVQWSDLITSLYL--LGHDIRISAEIMKGPIVELIYIDIVGLAQFKKTLPSWVHYMLRVLDSFGTE-PEFNHANYGKWNLNQFYTMFPHTNSFLGF-VV-------EQHLNSSDIHHINEIKRQQSLVYGKVDSFWKNKKIYLDIIHTYMEVHATVYNVKNHGI------------LSGRDLQFLLRETKLFVGLGFPY--EG--PAPLEAIANGCAFLNPKLTSQHPYAIGRPHVWTVD-LNNQEEVEDAVKAIL--------NQKIE---PYMPYEFT------------------CEGMLQRINAFIEKFCHGQVMWPPLSALQVKLAEPGQSCKQVCQESQLICEPSFFQHLNKDKDMLKYKVTCQSSELA-KDILVP--SFDPKNKHC--VF--QGDLLLFS |
3 | 2nzxC | 0.16 | 0.10 | 3.32 | 1.34 | MapAlign | | ------------FQPLLDAYVE---------------------------------------SASIEKMASKSPPPLKIAVANDEEIKEFKNSVLYFILQRYTITLHQNPNE----FSDLVFG-N--PLGSARKILSYQNAKRVFYTGEN--------ESPNFNLFDYAIGFDEDRYLRMPLYYYALKKPSHCFKEKHPNLCAVVPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTL-------------GYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP-KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYEN----PLN----------TLDGKAYFYQNLSFKKILAFFKTILE-------------------------------------------------------------NDTIYHD--------------------------- |
4 | 7dttA | 0.09 | 0.07 | 2.52 | 1.05 | MapAlign | | ----------------------------------------------------------------------QKKGDIILGGLFPRWLQAMIFAIINSLLPNLTLGYRIFTSFVHIPSTIAVVGTGSVSTAVANLL-GLFYIPQVSYASSSR----LLSNKNQFKSFLRTIPNDEHQ--------------------ATAMADIIEYFRWNWVGTIAADD---DYGRPGIEKFREDICIFSELIS-------------QYSDEEEIQHVVEVIQNAKVIVVFSS---GPDLEPLIKEIVRIGKIWLASESSLIAQYFHVVGGTIGFALPRKSFAKEFWEENCHLQEFRPLISTPYIDYTHLRISYNVYLAVYCLPGRGLFTNGSCADIKKVE-AWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYYTCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPA-YAVSAVAILAASFGLLACIFF |
5 | 2nzxC | 0.16 | 0.10 | 3.46 | 1.16 | CEthreader | | ----------------------------------------------------MFQPLLDAYVESASIEKMASKSPPPLKIAVANWWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQ-NAKRVFYTGENESPNFIGFDELDFNDRYLRMPLYYDRLHHKAESVNDTTAPYKHPNLCAVVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLGYN-------------VKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP-KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYE-----------------NPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNPF---------------------------------------------------------------------------------- |
6 | 3k5wA | 0.08 | 0.06 | 2.31 | 1.00 | MapAlign | | -------YEKVNALDKRAIEEL-----------------------------FLSEDILENAAALERAVLQNASLGAKVIILCGSGDNGG-DGYALARRLVGRFRVLVFENNL---ECDVLIDCGSHFKLLNFESLSQKARFKIACD------IPSGVDKRAF-KADLTISGAIGELKVGEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHVLLGKHSG--AGLLSALSALSSGVVSVQLECLVFC---------------------ENFNLLSAFALG-G-L--ENIPKDFNRWLEL-APCVLDAGFYHKEIQALEKEAVLTPHPKEFLSLLNELLDNKLARDFSQKYPKVV----------LLLKGANTLIAHQGQVFINIGSGDVLAGLILS-------------------------------------------LLSQNYTPLDAAINA--SLAHALASLEFKNNYALTPLDLIEKIKQL------- |
7 | 2nzxC | 0.17 | 0.11 | 3.54 | 1.16 | MUSTER | | ---------------------------------------------MFQP--LLDAYVES----ASIEKMASKSPPPLKIAVANWWGDEEIKEFKNS---SQRYTITLH------QNPNEFSDLVFGNPLSARKILSYQNAKRVFYTGENESPNF--------NLFDYAIGFDEDRYLRMPLSLYALKKPSHCFKEKHPNLCAVVNLKRGFASFVASNPNAP-IRNAFYDALNSIEPVTGGGSVRNTLGYNVK-------------NKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDF-NPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYE-------------NPLNTLDGKAYFYQNLSFKKILAFFKTILEND--------TIYHDNPF------------------------------------------------------------------------------ |
8 | 3s27A | 0.07 | 0.05 | 2.16 | 0.83 | DEthreader | | FN---LLPLLKFLRLHSKNLLSKA------------EE-FEAKFEEIGLE---R-G-G-D-----ERVLIFLRVPVFNVVILSAILDQVR-LEIELQRIQQLIPRILIAALSLNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALETKYFQFTADIFANHTDFIITSTFQIFNIVSPGADS--YFPYTEE-----------DKKKPILFT-ARLDRVKNLSGLVEWYGKNRANLVVVGGEYFRWISS--Q-DR--V-RNGELYRYICDTKGAFVQPALYEA--F-GLTVVEATCGL-PTFATCKGGPAEIIVHGKSGFHIDPYHGD-QAADTLADFFTKCKEDPSHWDEISKGGLQR--IEEKY-------------TW-QIYSQRLLTLTGVYGFWKHVSN-----LDRLEA--------------------------------------------YLEFYA-LK-------Y-RPLAQAVPL---- |
9 | 2nzxC2 | 0.22 | 0.07 | 2.25 | 6.15 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CFKE----KHP-NLCAVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLGYNV-------------KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP-KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAY-------------------------------------------------------------------------------------------------------------------------------- |
10 | 2nzxC2 | 0.22 | 0.07 | 2.12 | 1.88 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNLCAVVNDKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLG-------------YNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP-KSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGK---------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|