>Q400G9 (498 residues) MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA RKLARAESAPRPWDGEES |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCTEAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSARKLARAESAPRPWDGEES |
Prediction | CCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCSSSCCCCCCCHHHCCCHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCSSSSSSSCCCCSSSSSSSSCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC |
Confidence | 987761221367879999976058889999998736904555677753772112687666885422237999996889997510147777777669997489876656549999999999997289716765887765421102457861111113899999999838987428999844567547987548887447993799996415865456787776531123203677777333566542268999999999999999871776689854424789997887548822398999999998598679999999999998613687622255445656687521135777777887765567888543444455674111222211345678899369999999999999999998604899999988775431244432668876567998887545788862225788887631231236789887776669 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCTEAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSARKLARAESAPRPWDGEES |
Prediction | 744043544252435203510244354125313551547434113411446451144041345221133273234205401644453455563310000002426541436005201500430025040422550525414122122542431221022004103722364000000000000033651000001022521000000021345025332625234235434644544345444423122010110021001000000002204222000000230420143324003200410231041412510430240054146343434224333245324123543232644543344344413353144434423544244343454355254115004403400130041035504563044024004003313111230323364141465131023003440340144034442453644325253678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCSSSCCCCCCCHHHCCCHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCSSSSSSSCCCCSSSSSSSSCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCTEAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSARKLARAESAPRPWDGEES | |||||||||||||||||||
1 | 2x7mA | 0.27 | 0.10 | 3.02 | 0.97 | CEthreader | --------------------------------------------------------------------------------------LVPRGSHMKLCLVAFDGRI-PMLSSIVDRFEEHVSEYLGEVKVKKKRAKLPEHAYS-------KVRGQYLARALLDTLRGMKGE-YDRVLGLTSEDLYAPG-LNFVFGQARCPGREAVVSVARLLD---------------------------------PDPELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNLKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 2erpA | 0.07 | 0.04 | 1.82 | 1.10 | EigenThreader | ------------------------------------------------------------------------SNLTPEQQRYLNA-------KKYVKLFLKYGRNLTAVRTRMYDIVNVITPIYHRMNVALVNTDKI---IVQS----------STLDLFAKWRATDLRKSHDNAQLLTG---INFNG--PTAGLGYTMYSAGIVQDHSKI----------------------------------------HHLVAIAMAHEMGHNLGMDHDKDTCTCCVMAGAL--SCEASFLFSDCSQKDHREFLIKNM-------PQCILKKPLKTDVVSPAVCGNYFVEVGEECDCGSPRTCRDGAQCAEGLAKDECDMADVCTGRSAECTDR----FQRNGQYNGK-------------------CPIMADQCIALFGACFQFNR----EGNHYGYCRQNTKCEPQDVKCGRLY---------------CFPNSPENKNPCNI | |||||||||||||
3 | 2x7mA | 0.27 | 0.09 | 2.90 | 1.25 | FFAS-3D | ---------------------------------------------------------------------------------------VPRGSHMKLCLVAFDGRIP-MLSSIVDRFEEHVSEYL-GEVKVKKKRAKLPE------HAYSKVRGQYLARALLDTLRG-MKGEYDRVLGLTSEDLYAPGL-NFVFGQARCPGREAVVSVARLLDPD---------------------------------PELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2x7mA | 0.27 | 0.10 | 3.02 | 1.18 | SPARKS-K | --------------------------------------------------------------------------------------LVPRGSHMKLCLVAFDGRIPML-SSIVDRFEEHVSEYLG--EVK----VKKKRAKLPEAYSKVRG--QYLARALLDTLRGMKGE-YDRVLGLTSEDLYA-PGLNFVFGQARCPGREAVVSVARLLDPD---------------------------------PELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNLKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 2x7mA | 0.29 | 0.10 | 3.12 | 1.42 | CNFpred | --------------------------------------------------------------------------------------LVPRGSHMKLCLVAFDGRIPM-LSSIVDRFEEHVSEYLG--EVKVKKKRAKLPEHAYSK-----VRGQYLARALLDTLRGMK-GEYDRVLGLTSEDLYAPG-LNFVFGQARCPGREAVVSVARLLDP---------------------------------DPELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6ar6A | 0.03 | 0.02 | 1.15 | 0.67 | DEthreader | TQEDEYVAIL----------------------------------------------------------------FKEYLVTEVELKNNNL-TPV--NLHFVWIGGQIN-T---------------------VNVFYDSGNDVEFKFNLEQLVEAILISALKEIGGMYLGDMEAVKIA-----------------KDSYCSNLIVQIERYLNSLNAI----DF--------------------RVGFFPDVK-TTINLSGPEAYAAAYQDLLMF-KE--GSM---------N-I-HL--IEADLRNFEIS---------------L--FDDARAKA-FE-E---LDFSQNIQGDKISYEAACNLFAKTP----LFQKNIEEIALTFIGGYELKEEILECEINVISNIDTQIVEERIEEAKNLNYDEFKINFFSTMIVEPNYDISSTVINFSQYLYIDSCVN-KVVISPEVIVLDA-NYINE------------------ | |||||||||||||
7 | 2x7mA | 0.27 | 0.09 | 2.89 | 1.13 | MapAlign | --------------------------------------------------------------------------------------------HMKLCLVAFDGRI-PMLSSIVDRFEEHVSEYLGEVKVKKK-RAKL--PEHAYS----KVRGQYLARALLDTLRGMKG-EYDRVLGLTSEDLYAPGLN-FVFGQARCPGREAVVSVARLLDP---------------------------------DPELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 2x7mA | 0.28 | 0.10 | 3.13 | 0.71 | MUSTER | --------------------------------------------------------------------------------------LVPRGSHMKLCLVAFDGRI-PMLSSIVDRFEEHVSEYL-G-EVKVKKKRAKLPEH-----AYSKVRGQYLARALLDTLRGMKGE-YDRVLGLTSEDLYA-PGLNFVFGQARCPGREAVVSVARLLDPD---------------------------------PELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNLKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2x7mA | 0.27 | 0.10 | 3.02 | 4.64 | HHsearch | --------------------------------------------------------------------------------------LVPRGSHMKLCLVAFDGRIPML-SSIVDRFEEHVSEYL-G-EVKVKKKRKLPEH------AYSKVRGQYLARALLDTLRGMKGE-YDRVLGLTSEDLYAP-GLNFVFGQARCPGREAVVSVARLLDP---------------------------------DPELYLERVVKELTHELGHTFGLGHCPDRNCVMSFSSSLLEVDRKSPNFCRRCTELLQRNLKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2xhqA | 0.26 | 0.09 | 2.66 | 0.93 | CEthreader | ------------------------------------------------------------------------------------------GSHMKIYIQPLSV-----NSHTVEVLANSLPKIF-NAEVFVLPASDVSLKCYNASRR------QYNSTCILRMLP-----PIKVTLGVTGKDIYAKG-MNFVFGEAELGGARAVLSVFRLTTAD---------------------------------SELYRERVVKEAVHEIGHVLGLKHCSN-NCVMRFSNSVQDVDRKPVSFCRECASKIRY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |