Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCSSSSSCCSSSSSHHHHHHHCCHHHHHHHCCCCCCCCCCSSSSCCCCHHHHHHHHHHHCCCSSSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC MECKIEGKEKYQHSLNLLNKIQNMKELAEMIDVVLTAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQREVILYDITAESVSVLLNYMYNAALEINNANVQTVAMAAYFMQMEEVFSVCQKYMMDHMDASNCLGIYYFAKQIGAEDLSDRSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNKELRTVHLVELLKQVRLELVNPSFLRQALRRNTMLLCDADCVDIIQNAFKAIKTPQQHSLNLR |
1 | 3i3nB | 0.20 | 0.19 | 5.95 | 1.33 | DEthreader | | -----------CS-SHCSELSWRQNEQQGLFCDITLCFGREFRAHRSVLAAATEYFTPL-LSGFSESRSGRVERKGPEPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKA-ADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHARAE------- |
2 | 3i3nB | 0.21 | 0.21 | 6.50 | 1.78 | SPARKS-K | | --SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVSEPGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------ |
3 | 3i3nB | 0.22 | 0.20 | 6.24 | 1.42 | MapAlign | | ------------HCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFT-PLLSGQFSERSGRVERKWPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAA-DIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQK-PTYLTRVKP-ERLVANNEVCVKLVADAVERHA---------- |
4 | 3i3nB | 0.21 | 0.21 | 6.50 | 1.11 | CEthreader | | --SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLS-QKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------ |
5 | 3i3nB | 0.21 | 0.20 | 6.29 | 1.76 | MUSTER | | --SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHY-TL-SQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------ |
6 | 3i3nB | 0.22 | 0.21 | 6.49 | 3.11 | HHsearch | | --SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRE------- |
7 | 3i3nB | 0.20 | 0.19 | 6.19 | 2.76 | FFAS-3D | | ---EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKWSSEPDTVEAVIEYYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHYTL--SQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQK-PTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------ |
8 | 3i3nB | 0.20 | 0.19 | 6.19 | 1.78 | EigenThreader | | SEAEDFECSS--HCSELSWRQNEQRRQGLFCDITLCFGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKWPEPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH--YTLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRL-SQKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------ |
9 | 4ap2A | 0.22 | 0.20 | 6.36 | 1.69 | CNFpred | | ------------HCSELSWRQNEQRRQGLFCDITLCF-GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHAL--------- |
10 | 6i2mA | 0.22 | 0.16 | 5.06 | 1.17 | DEthreader | | ----------MNNSSELIAVINGFRNSGRFCDISIVINDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILKNLCSKNCIDFYIYADKYNNKKIESASFNTILQNILRLINDENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQ-------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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