Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCSSSCCSSSSSSSSSSSSSSCCCSSSSSCCCCCSSSCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCSSSCCCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC ENPYLIGGRKFDLRVYVLVMSVFAECLLWSGHRRQDVHLTNVAVQKTSPDYHPKKGCKWTLQRFRQYLASKHGPEAVETLFRDIDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGREKRVGGFDLMWNDGPVSREEGAPDLSGMGNFVTNTHLGCVNDRKKQLRQLFCSLQVQKKASS |
1 | 6vzqA2 | 0.40 | 0.31 | 9.05 | 1.17 | DEthreader | | SKPFIIDGFKFDLRVYVLVTSCLRVFVYNEGLARFA---TNYSINKHSSNFVQDSGSKRKLSTFNSYMKTH-GY-DVEQIWRGIEDVIIKTLISAHPVIKYFSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNRQKTEEEKCGGFRLIYPG--LE--------------------------------------------- |
2 | 6vzqA | 0.34 | 0.30 | 9.05 | 1.73 | SPARKS-K | | SKPFIIDGFKFDLRVYVLVTSCDPVFVYNEGLDEICMHLTNYSINKHSSNFVAFSGSKRKLSTFNSYMKTHGYD--VEQIWRGIEDVIIKTLISAHPVIKHNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCD---------------KKKVLEEERQRGRFLQQCIR-------LEEVKGFQAMRLQKTEEYEKKNC |
3 | 4ylrA | 0.29 | 0.23 | 6.90 | 0.89 | MapAlign | | EKPFLMEGYKFDLRIYILVTSCDKIFLYHDG-------LVRM------GTEKYIPGSKRSIKWFTEFLQANQH--DVAKFWSDISELVVKTLIVAEPHVLSESVCFEVLGFDILLDRKLKPWLLQINRAPSFGTDQKIDYDVKRGVLLNALKLLNI--------RTMGNYRRIYP-------------------------PEDKALLEKYENLLAVAFQTFLS-- |
4 | 4ylrA1 | 0.29 | 0.23 | 6.91 | 0.79 | CEthreader | | FKPFLMEGYKFDLRIYILVTSCDPIFLYHDG-------LVRMGTEK------YIPGSKRSIKWFTEFLQANQH--DVAKFWSDISELVVKTLIVAEPHVLHASVCFEVLGFDILLDRKLKPWLLQINRAPSFGTDQKIDYDVKRGVLLNALKLLNIR--------TMGNYRRIYPPEDKALLEKYENLLAVAFQTFLSGR------------------------- |
5 | 5vlqA | 0.28 | 0.20 | 6.10 | 1.56 | MUSTER | | ERPLLIFGTKFDVRQWFLVTDWNPIWFYKEC----YVRFS------------VPTDNMWSSRQLQVHLHKLGAPHWEAVIVPGMKAAIIHAMQSAQDIVEYRKSSFELYGADFMFGENFHPWLIQINASPTMAASTTVTSRLCAEVQEDTLRIVLD--RKLDRNCDIGAFELIYKQ------------------------------------------------- |
6 | 6vzqA2 | 0.38 | 0.31 | 9.22 | 3.10 | HHsearch | | SKPFIIDGFKFDLRVYVLVTSCDPLFVYNEGLDEICMHLTNYSINKHSSNFVQFSGSKRKLSTFNSYMKTH-GYD-VEQIWRGIEDVIIKTLISAHPVIKHNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKYEKKNCGGFRLIYPGLNL---E-----------KYDKFF------------------------- |
7 | 6vzqA2 | 0.39 | 0.31 | 9.08 | 1.78 | FFAS-3D | | SKPFIIDGFKFDLRVYVLVTFVYNEGLARFATTSYSMHLTNYSINKHSSNFVQFSGSKRKLSTFNSYMKTHGYD--VEQIWRGIEDVIIKTLISAHPVITLNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNTEEYEKKNCGGFRLIYPGLNLEK-------------------------------------------- |
8 | 6vzqA | 0.34 | 0.27 | 8.12 | 1.18 | EigenThreader | | SKPFIIDGFKFDLRVYVLVTSPLRVFVYNEGNLDEICMHLTINKHSSNFVQDAFSGSKRKLSTFNSYMKTH-----GEQIWRGIEDVIIKTLISAHPVIKHNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDEYEKKNCGGFRLIYPGLNLEKYDKFF--------------------------------------- |
9 | 6vzsA | 0.38 | 0.30 | 8.82 | 1.67 | CNFpred | | SKPFIIDGFKFDLRVYVLVTSCLRVFVYNEGL-EICMHLTNYSINKHSSNFVQDSGSKRKLSTFNSYMKTH--GYDVEQIWRGIEDVIIKTLISAHPVIKH-SACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNC---------------------------------------------DKKKVLEEERQRGRFLQQCPN |
10 | 6vzqA | 0.40 | 0.31 | 9.05 | 1.17 | DEthreader | | SKPFIIDGFKFDLRVYVLVTSCLRVFVYNEGLARFA---TNYSINKHSSNFVQDSGSKRKLSTFNSYMKTH-GY-DVEQIWRGIEDVIIKTLISAHPVIKYFSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNRQKTEEEKCGGFRLIYPG--LE--------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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