Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CSSCCCCCSSSSCCCCSSSSSSSSSCCCCSSSSSSCCCCCCCCCCSSSSCCCCCCCCSSSSCCCCHHHCSSSSSSSSSCCCSSSSSSSSSSSSCCCCCCCCCSSSSCCCCSSSSSSSCCCCCCCCCCCCCSSSCCCCCCCCSSSSSSSCCCCCSSSSSSSCCCCCCCCSSSSSSSCCCCCSSSCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCSCCSSSSSSSCCCCCCCCSSSSSSSSCCCCCSSSSSSCCCCCSSSSCCCCCCCSSSSSSSSSCCCCCCCCSSSSSSCCCCCCCCCCSSSSSSSSHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SVMTSATKIMSALGSNVLLRCDATGFPTPQITWTRSDSSPVNYTVIQESPEEGVRWSIMSLTGISSKDAGDYKCKAKNLAGMSEAVVTVTVLGITTTPIPPDTSERTGDHPEWDVQPGSGRSTSVSSASSYLWSSSFSPTSSFSASTLSPPSTASFSLSPFSSSTVSSTTTLSTSISASTTMANKRSFQLHQGGKRNLKVAKNGSKLPPASTSKKEELALLDQTMLTETNAAIENLRVVSETKESVTLTWNMINTTHNSAVTVLYSKYGGKDLLLLNADSSKNQVTIDGLEPGGQYMACVCPKGVPPQKDQCITFSTERVEGDDSQWSLLLVVTSTACVVILPLICFLLYKVCKLQCKSEPFWEDDLAKETYIQFETLFPRSQSVGELWTRSHRDDSEKLLLCSRSSVESQVTFKSEGSRPEYYC |
1 | 2jllA | 0.14 | 0.12 | 3.96 | 1.73 | SPARKS-K | | HIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVFTFTEDGRIEVKGQHGS--SSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYWEGNPINISCDV------KSNPPASIHWRRLVLPAKNTTNLKTYSTGRKMILEIAPTSDN---------------DFGRYNCTATNHIGTRFQEYILALADVPSSP----------------------YGVKIIELSQTTAKVSFNKPDSHGIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGK-GQGDYSIFQTLPVREPSPPSIHGQPSSGKSFKLSIGGAPILEYIVKYRSQWLEK---KVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPN-------------- |
2 | 2jllA | 0.14 | 0.12 | 4.09 | 1.27 | MUSTER | | HII-QLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFSLDGRIEVKGQHG--SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYWEGNPINISCDVKSNPP------ASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTAT-------------NHIGTRFQEYILALADVP----------------------SSPYGVKIIELSQTTAKVSFNKPDSHGIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLS-GGAPILEYIVKYRS---QWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPN-------------- |
3 | 2jllA | 0.12 | 0.09 | 3.08 | 2.28 | FFAS-3D | | --IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFEKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPA--SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKI------EIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGALEYIVKYRSQWLEK----KVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPN------------------------------------------------------------------------------------------------------ |
4 | 2jllA | 0.14 | 0.12 | 4.02 | 4.12 | CNFpred | | PHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTF-GRIEVKG--QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWENPINISCDVKSN------PPASIHWRRDKLVLPTTNLKTYSTGRKMILEIAPTSDND----------------FGRYNCTATNHIGTRFQEYILALADVPS----------------------SPYGVKIIELSQTTAKVSFNKPDSHPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITK-PILEYIVKYRS-QWLEKKVQG--NKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPN-------------- |
5 | 2v5yA | 0.09 | 0.05 | 2.09 | 0.67 | DEthreader | | PHFLRIQNVEVNAGQFATFQCSAIGRTVGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISYAELVVKEPPVPIAPP------------NANSI--NGDGP-IVAREV---------PVD---------STSYKISVLLTR-GGTGSPG------------------------------------LRT--RT-KC-ADPM--RGPRKLEVVEVK-------SRQITIRWEP--NLTVHYCYQV--GGQEQVREEVSQHTITNLS-P----YTNVSVKLILMKESQELIVQTDEDLPGAVPTESIQGS--------FLQWREYEI--------------------ETH-------------GTTYSFTI------ATNQFTTKI------------------ |
6 | 5i99A | 0.14 | 0.12 | 4.10 | 1.64 | SPARKS-K | | DFSRNPKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFL--NDGG---LKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDAVGESVILPCQVQHDPLLD----IMFAWYFNGALTDFKKDGS------------HFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP----------------------ENVKVDEITDTTAQLSWTEGTDSHVISYAVQARTPFSVGWQSVRTVPEVHTATVVELNPWVEYEFRIVASNKI-GGGEPSKVRTEEAAPIAPSEVSGGGGSRSELVITLQNGGGFGYVVAFRPLGVTTWTVVTSPDNPRYVFRSIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEE-------------- |
7 | 2v5yA | 0.14 | 0.12 | 4.11 | 0.63 | MapAlign | | PHFLRIQNVEVNAGQFATFQCSAIGTVGDRLWLQGIDVRDAPLKEIKVT-SSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP-------------------------------VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTG------SPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFVTRCSYNLTVHYCYGGQEQVREEVSDTSHPQHTITNLSPYTNVSVKLILMNPGRKESQELIVQTDEDLPGAVPTSIQGSTFEEKIFLQWREPVITLYEITYKAVSSFQSGRVSKLGETHFLFFGLYPGTTYSFTIRASTAK---GFGPPATNQFTTK--------------- |
8 | 2jllA | 0.12 | 0.10 | 3.66 | 0.61 | CEthreader | | PHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEKSRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPA-----SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALAD-----------------------------------VPSSPYGVKIIELSQTTAKVSFNKPDSHGIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDILEYIVKYRS---QWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPN-------------- |
9 | 5i99A | 0.15 | 0.13 | 4.29 | 1.19 | MUSTER | | DFSRNPMKVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDG-----GLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDAVGESVILPCQVQHDPLLD----IMFAWYFNGALTDFKKDGSH---------FEKVGGSSSGDLM---------------RNIQLKHSGKYVCMVQTGV-----------DSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDSHVISYAVQARTPFSVGWQSVRTVPETHTATVVELNPWVEYEFRIVASNKIGGSLPSEKVRTEEAAEIAPSEVSGGGGSRSELVITLQNGGGFGYVVAFRPLGVTTWIQTTSPDNPRYVFRNIVPFSPYEVKVGVYNNKPFSPVTTVFSAEEE----------------- |
10 | 4pbxA | 0.16 | 0.14 | 4.72 | 0.81 | HHsearch | | NIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSGRIKQLRS-G----ALQIESSEETDQGKYECVATNSAGVRSSPANLYVRVAPRFSILPMSHEMPGGNVNITCVAV---GSPM---PYVKWMQGAEDLTPEELTDVK--DSANYTCVAMSSLGVAPDPVSYYVIEYKSTTTRYSIGGLSPNSEYEIWVSAVGQGPPSES--------VVTRTGEQAPASAPRNVQARMLSATTMIVQWEEPVEPGIRGYRVYYTMEPEHNWQKHNVD-DSLLTTVGSLLEDETYTVRVLAFTSVDGPSDPIQVKTQQGVPGQPMNLRAEARSETSITLWSPPESIIKYELLFREGDHGREVGRTFDPTTSYVVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTL---------G------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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