Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHHHHHCCCCSSSCCCCCCCCSSCHHHCCCCCSCCCCCSSCCCCCCCSSCCCCCCSSCCSSCCCCCSSCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHSCCCSCCCCCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCHHHCCCSCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCHHHHSCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCC MPHSPLISIPHVWCHPEEEERMHDELLQAVSKGPVMFRDVSIDFSQEEWECLDADQMNLYKEVMLENFSNLVSVGLSNSKPAVISLLEQGKEPWMVDRELTRGLCSDLESMCETKILSLKKRHFSQVIITREDMSTFIQPTFLIPPQKTMSEEKPWECKICGKTFNQNSQFIQHQRIHFGEKHYESKEYGKSFSRGSLVTRHQRIHTGKKPYECKECGKAFSCSSYFSQHQRIHTGEKPYECKECGKAFKYCSNLNDHQRIHTGEKPYECKVCGKAFTKSSQLFLHLRIHTGEKPYECKECGKAFTQHSRLIQHQRMHTGEKPYECKQCGKAFNSASTLTNHHRIHAGEKLYECEECRKAFIQSSELIQHQRIHTDEKPYECNECGKAFNKGSNLTRHQRIHTGEKPYDCKECGKAFGSRSDLIRHEGIHTG |
1 | 6edoA | 0.08 | 0.06 | 2.29 | 0.83 | DEthreader | | HVIEVLVTEIA-----------------FCMSFLTLLDHT-----------RDQQNAILKHYNLLNIARACSPILIKTSMIEYVAKKT-----ELTILHKRLLFRWAFREAGYMLLERRPMIRLFCLVWRCLL---A-KEPVLLKVCQAEKELHIINAHTENGIAFFLLDEISLADDSVLE-MNPG-----GKKEL---VP----------AKWHANEYLYTVSIRDVSAVFIVLFNAMV----ASVLRAVLKPILLLIALHQLVRINLSDQT--PFVLLDELNLAS------------------NPQG--------------------------EA-LKEKDMI-E-IAACNYH-QVNEWRTLRWLQLLNDA-------GFSLSSQCFKVGHSLLPVLEEISYVGGG-GGGGGGGGGGGGGGGGGGGGGGG |
2 | 5v3jE | 0.54 | 0.35 | 10.02 | 6.82 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
3 | 1vt4I3 | 0.07 | 0.07 | 2.99 | 1.37 | MapAlign | | PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTFRMVFLDFRFLEQKIRSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKILICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5v3jE | 0.54 | 0.34 | 9.95 | 1.50 | MapAlign | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH-- |
5 | 5mu1A | 0.05 | 0.05 | 2.37 | 1.05 | MapAlign | | ELAALGMKAASFVMQSEKPFEALLKLTQREVFLPEGSNVLWLNGLHLIDRQIQPFGLVDLLTRERKLIKSVLDLGLTGVDLLGHAEVAHAKSGDDEPRRFDWRDDIEEGQVIIWLNNLEKDKRYKSFSPSIWVLIHHFGHGLPQIRRDVFNLVVPVDLTKADDVFVPLTPTGQAIDQAKVVYYLLENYGLAAYPNERIFNEVIKSLGDVPTVFF--DGFPIPRLRVMNHRLMQDAALTVADLDDIEGQVDIVHNPSVLAQRKAGDNFVILNGRVLGPIKKEDFEVFLQAERRTRIVYLEDLGLDVSGPLSAAKLTSVTATIFFAINPAEIGWLVHLRVFLNPTGVPRETLLVVSKVADLDLRIKDIKAKAISRAPRGVQLVLETEHFDTIIFQFAGVYNIRLKTLESVGAKGWGDDNTEVVLMDFGTTLYPR |
6 | 5v3jE | 0.54 | 0.35 | 10.02 | 1.18 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
7 | 5x0mA | 0.06 | 0.06 | 2.69 | 1.00 | MapAlign | | FPAELASTPLEDFDPFYKNKKTFVVVTKAGPIRRVAISTMVQPIFSYFIMITELVFLSIYTIEVVVKVLAGWRTIVDALSLSITSLKDLVLLLLFSLFVFAVLGLQIYMGVLTQKCVKHFPADGSWGNFTDERWFNYTSNSSHWYIPDDWIEYPLCGNSSGAGMCPPGYTCLYGGNPNYGYTSFRLVTLDWLYLHILFFIIVVYGTTSIYIAFKDSWNDFIVFRLLRVFRLAKFFAIIGMYFPDGDLNFTDFLHSFMIVFRRVCFLLAFFVIEMIIMAVSKWYWLDFIVVAGKFYKCVHENYTWNFDHGNAYLSLLQFIIIFFNII-DFLYVLAIPTLLRILRILREFFMHIDAGAIDDNFKTFGQSIILAIANEEDCRAPDHELGYNCGSRALGIAYLYIRYDQLSLLEPLVQKIIIFYKDVLEALVKDVF |
8 | 5v3jE | 0.54 | 0.35 | 10.02 | 3.61 | MUSTER | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
9 | 5v3jE | 0.54 | 0.35 | 10.02 | 2.65 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
10 | 5v3jE | 0.54 | 0.35 | 10.02 | 2.80 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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