>Q3B7T3 (259 residues) MSFKRPCPLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSCITIIVGSIR RDRQARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMRYACSSSEDW PPPLDISSDGDVDATVLRELYPDSPPGYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDG TSDSGSGHSPGRHQQEQRTPAQGGLHTVSMDTLPPYEAVCGAGPPSGLLPLPGPDPGPRG SQGSPTPTRAPASGPERIV |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MSFKRPCPLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSCITIIVGSIRRDRQARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMRYACSSSEDWPPPLDISSDGDVDATVLRELYPDSPPGYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLHTVSMDTLPPYEAVCGAGPPSGLLPLPGPDPGPRGSQGSPTPTRAPASGPERIV |
Prediction | CCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9733445413126654435640025888643122355566788788877636531100101201233332033222222332334555544455768888666776777667888877789998777777656432323589999986667799987666888999998878988887777778888887656778878788998888878899974434789998866589999998889999898879999976679 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MSFKRPCPLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSCITIIVGSIRRDRQARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMRYACSSSEDWPPPLDISSDGDVDATVLRELYPDSPPGYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLHTVSMDTLPPYEAVCGAGPPSGLLPLPGPDPGPRGSQGSPTPTRAPASGPERIV |
Prediction | 7725341441324432332232344363310101111201111000031102000011035534142453544444443444444455445255523453344433344144323665514131324542534352145221662132451334514422223762332424342452515253342423334455543447442332435422414331564342331316135443774623333463435336327 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSFKRPCPLARYNRTSYFYPTFSESSEHSHLLVSPVLVASAVIGVVIILSCITIIVGSIRRDRQARLQRHRHRHHRHHHHHHHHRRRRHREYEHGYVSDEHTYSRSSRRMRYACSSSEDWPPPLDISSDGDVDATVLRELYPDSPPGYEECVGPGATQLYVPTDAPPPYSLTDSCPTLDGTSDSGSGHSPGRHQQEQRTPAQGGLHTVSMDTLPPYEAVCGAGPPSGLLPLPGPDPGPRGSQGSPTPTRAPASGPERIV | |||||||||||||||||||
1 | 6ww7A | 0.09 | 0.09 | 3.50 | 0.48 | CEthreader | DKGTAEGAVDAMLLHGQDVITVSNGGRIMRSWETGGLNWEITLDAVLKKTTLALHHLSSGHLKWVEHLPESDSIHYQMVYSYGSGVVWALGVVPFSHVNIVKFNVEDGEIVQQVRVSTPWLQHLS-GACGVVDEAVLVCPDPSSRSLQTLALETEWELRQIPLQSLDLEFGSGFQPRVLPTQPNPVDASRAQFFLHLSPSHYALLQYSLLKNFPQTALVSFATTKTVAAVMACRNEACFNQTYTINLYLVETGRRLLDT | |||||||||||||
2 | 6gmlV | 0.05 | 0.05 | 2.33 | 0.57 | EigenThreader | GGGGGGGGGGGGGGGGPSLQSALPFLDLHGTPRLEFHQSVFDELRDKLLERVSAIA------SEGKAEERYKKLEDLLEKSFSLVLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQIWQDNQGKNRTLFLRTRNVHYCTLRAKGQEQVLGDLSMILCDPFAINTLALSTVRHLQELVGQETLPLLLLLRLLALGQGAWDMIDSQVFKRHALRLLIHLHPRVAPSKLEALQKALEPTGQSGEAVKELYSQL | |||||||||||||
3 | 4nl6A | 0.11 | 0.10 | 3.64 | 0.45 | FFAS-3D | MSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKA-------YDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASAIWSEDGCIYPATIASIRETCV--------VVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPP---PPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDADAL | |||||||||||||
4 | 4ewcA | 0.13 | 0.12 | 4.16 | 0.91 | SPARKS-K | TKLNVVTANGKVKQVEVNRPDYRKGQTESSISNQCALIKSVLSADQLFASYTTLAEGANIPSKYLRHRNLGKRIKNSKSKIFSIIQKKVRGRCR---------TEEQRLLTSALKISDG--------ENKFQRIDTLCTSFLIDPPRTTKCFIPPISSLYIQEGNSVLADFKNGCREAKSTFTSATAFCSADIIENAVPGSERYRSNIKANTTPKKDSYTIQGLRLSNVRYEA-RPEDRSWQVNVTDSGGLAVFNQGAI | |||||||||||||
5 | 2witA | 0.15 | 0.04 | 1.30 | 0.55 | CNFpred | -----------------------------SNLQNVTIVAATPFLFVVIGLMFALVKDLSNDVIYLEYREQQRFNARLARERRVHNEHRKRELAAK-------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1ciiA | 0.06 | 0.04 | 1.81 | 0.83 | DEthreader | ---------N-KITTSINAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDINFTTEFLKSVSEKYGAKAEQLA-----REMAGQAKITY-IRAIAAALESVK-S-ADTEKRTENWRLFVKT-E----------TIIAGNAA---TA-------LVA-L--S---------------------------------------------- | |||||||||||||
7 | 2pffB | 0.08 | 0.08 | 3.19 | 1.03 | MapAlign | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
8 | 4nl6A | 0.14 | 0.13 | 4.35 | 0.58 | MUSTER | MSSGGSGGGVPEQEDSVLFRRGTGQSDDSDI--TALIVASFK---------------ALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQWSEDGCIYPASIDFKRETCVNLSDLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNI-KPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPF---PSGPPIIPPPPPICPDSLDDADALGSQNQKEGRCSHSLN-- | |||||||||||||
9 | 2pffB | 0.19 | 0.17 | 5.49 | 0.82 | HHsearch | SSLVEPSKVGQFDQVLTEFENCYLEGNDIHALAAKLLQYHVLVGDLIKFSAETL--SELIRTTLDAEKVFTQGLNIL-------EW----LENPSNTPDK-DYLLS---IPISCPLIVGFTP-GELRSYLKGAVTAVAIAETDSWESFFVSVRKAITVLFFPNTSLPPSILEDSLENNEGVPSPMNSHLPAGKQV------EISLVNGAVVSGPPQLTLRKAKAPSGLDQSRIPFSERKKFSNRFLPVASP-FHSHLLV | |||||||||||||
10 | 1h3iA | 0.12 | 0.10 | 3.42 | 0.46 | CEthreader | -----------------------------------------------FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVSRDWALNGNTLSLTVIDVPEPYNHVSKYCASYDMFVHPRFGPIKCI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |