Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCSSCCCCCCHHHCCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCSCCCCCCCCCCSSCCCCCCHCHCCCCCCCCSSCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCC KRELIQGIFMGEHREGFETQLKTNESVASQDICGEKISNEQKIVRFKRNDSWFSSLHENQESCGIDYQNKSHERHLRNHMVENIYECYEENQDGQTFSQVPNLDSLKRNTEVKSCECHECGKAFVDHSSLKSHIRSHTGSKPYQCKECGKAFHFLACFKKHMKTPTEE |
1 | 4p9sA | 0.05 | 0.04 | 1.98 | 0.83 | DEthreader | | IGGGCVSHDSIKLYERFHQPGSI--GHIDPSLTMA--QYYGFGYGIIHAGGVGTYLSDWILHG--EPPFDL-IELD--PNRYGKWTTQYAKERFAGRTRFHAWEQ-PHWFYT----------GVIDLSGVLGVARLLTSELVFKFL-----IRISGLGTEPTRRLQKD |
2 | 5v3gD | 0.29 | 0.28 | 8.51 | 4.49 | SPARKS-K | | VCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPY--VCRECGRGFRDSNLLSHQRTHTGEKPYVCRE---CGRGFSWQSVLLRHQRTTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT-- |
3 | 1vt4I | 0.06 | 0.05 | 2.41 | 0.97 | MapAlign | | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG--GGGGGGGG |
4 | 5v3gD | 0.33 | 0.28 | 8.40 | 0.75 | CEthreader | | ---------------------PGSEKPYVCRECGRGFSNKSHLLRHQR--THTGEKPYVCRECGRGFRDSHLLSHQRTHTGEKPYVC---RECGRGFRDKSNLLSHQRHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGE |
5 | 5v3gD | 0.29 | 0.28 | 8.51 | 3.16 | MUSTER | | VCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCR--ECGRGFRDKNLLSHQRTHTGEKPYVCRE---CGRGFSWQSVLLRHQRT-GEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT-- |
6 | 5v3jE | 0.25 | 0.24 | 7.40 | 1.49 | HHsearch | | KCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTG--EKPHKCKECGKGFISDSLLRHQSVHTGETPYKC---KECGKGFRRGSELARHQRHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
7 | 5v3gD | 0.30 | 0.29 | 8.67 | 1.97 | FFAS-3D | | VCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVC--RECGRGFRDKSLLSHQRTHTGEKPYVCRE---CGRGFSWQSVLLRHRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT-- |
8 | 5v3jE | 0.22 | 0.21 | 6.59 | 1.02 | EigenThreader | | KCFECKAFMRPSHLLRHQRIHTGEKPHKCKEC-GKAFRYDTQLS----LHLLTHAGARRFKDCDKVYSCASQLALHQMSHTGEKPHKCKECG-KGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGD |
9 | 5v3mC | 0.25 | 0.24 | 7.39 | 6.60 | CNFpred | | KCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHT---EKPHKCKECGKAFRYTQLSLHLLTHAGARRFECK---DCDKVYSCASQLALHQMSHGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGD |
10 | 4b9yA | 0.02 | 0.02 | 1.33 | 0.83 | DEthreader | | SFANS---GTEPFVLTAELGPEM--HPEDTQHAIGDADT--VH-NAYGHRWAEMLYQQQLDQFPELRPFIMGMIPSGFGGMP-RPFFEPAIDNK--S--YFWLLVTPIVSIPAPKGVW--RYQTLVKAMHYYADINASQYHLIICTPALACYQLQ-LV---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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