>Q2VWP7 (111 residues) ADAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIYRSKARKSSASKTAQNGTQQL PRTSASLASGNEVGKNLEGAVGNEESLMPMIMPNSFIDAKGGTDLIINSYG |
Sequence |
20 40 60 80 100 | | | | | ADAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIYRSKARKSSASKTAQNGTQQLPRTSASLASGNEVGKNLEGAVGNEESLMPMIMPNSFIDAKGGTDLIINSYG |
Prediction | CCCCSSCCCSSSCCCCCCCSSHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSCCCCSSSCCCCCSSSSSCCC |
Confidence | 985123451341345443331378999999999999984147776444432345322458864456688543466422221011101011047852354799515641289 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | ADAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIYRSKARKSSASKTAQNGTQQLPRTSASLASGNEVGKNLEGAVGNEESLMPMIMPNSFIDAKGGTDLIINSYG |
Prediction | 864532421231344213100003321331133022000122454534444435434753444545255455345516434643422222336433032441341223348 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCSSCCCSSSCCCCCCCSSHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSCCCCSSSCCCCCSSSSSCCC ADAKVYSGYYHLDQKSMTGIAVGVGIALTCILICVLILIYRSKARKSSASKTAQNGTQQLPRTSASLASGNEVGKNLEGAVGNEESLMPMIMPNSFIDAKGGTDLIINSYG | |||||||||||||||||||
1 | 3mktA2 | 0.10 | 0.10 | 3.68 | 0.51 | CEthreader | GHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKG | |||||||||||||
2 | 2bsgA | 0.06 | 0.06 | 2.68 | 0.57 | EigenThreader | YGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQINSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVN---GTNPNGSTVEERGLTNSIKANET | |||||||||||||
3 | 5jkiA | 0.15 | 0.05 | 1.52 | 0.30 | FFAS-3D | -----------LGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR------------------------------------------------------------------ | |||||||||||||
4 | 7jjvA | 0.10 | 0.07 | 2.68 | 0.92 | SPARKS-K | -----------------------------MQCDGLDGADGTSNGQAGASGLAGGPNCNGGKGGKGAPGVGTAGGAGGVGGAGNGGAGGSGGNSDVAAGGAGAAGGAAGGAG | |||||||||||||
5 | 2gifA | 0.13 | 0.04 | 1.25 | 0.60 | CNFpred | -----------INTLTMFGMVLAIGLLVDDAIVVVENVERVM--------------------------------------------------------------------- | |||||||||||||
6 | 6sl2A | 0.07 | 0.06 | 2.57 | 1.00 | DEthreader | VTRAIAYKFSSNDQVEKAGKRAGNFLDLLRATEGMVHDYEQRAQAENAAKMNVPHQVANCAKADPANTDAKINEYTVTMF-KYQEKSFDA-FD-G-NH-----------DN | |||||||||||||
7 | 5u2aA | 0.10 | 0.10 | 3.68 | 0.95 | MapAlign | RAISIDNTLTELTFEDLRDMSARVGNMLADMAFGAYMRDAVGLRSDDIFWNIADPGWAYGLYYAVTGPLLLGVPTILNEGGFTAENTYDIIERLGVTSLAGRLRVVSSAGE | |||||||||||||
8 | 2kluA | 0.14 | 0.09 | 3.06 | 0.81 | MUSTER | --------GPLVPRGSMALIVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERMSQIKRLLSEKKTSQSPHRFQKTHSPI--------------------------------- | |||||||||||||
9 | 2kluA | 0.11 | 0.06 | 2.30 | 0.84 | HHsearch | --------GPLVPRGSMALIVLGGVAGLLLFIGGIFFSVRSRHRRRQAERMSIKRSEKKTSQSPHRFQ--------------KTHSPI----------------------- | |||||||||||||
10 | 4ldqA | 0.08 | 0.08 | 3.19 | 0.46 | CEthreader | DVAAREAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHAFCTETRPYNQGARLTAFE | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |