Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCCCCCCCCCHHHHCCCCCCHHHCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSTLSAPTSPCSQSAPSFKPNQVRDLREKYSNFGNNSYHSSRPSSGSSVPTTPTSSVSPPQEARLERSSPSGLLTSSFRQHQESLAAERERRRQEREERLQRIEREERNKFRYKYLEQLAAEEHEKELRSRSVSRGRADLSLDLTSPAAPACLAPLSHSPSSSDSQEALTVSASSPGTPHHPQASAGDPEPESEAEPEAEAGAGQVADEAGQDIASAHEGAETEVEQALEQEPEERASLSEKERQNEGVNERDNCSASSVSSSSSTLEREEKEDKLSRDRTTGLWPAGVQDAGVNGQCGDILTNKRFMLDMLYAHNRKSPDDEEKGDGEAGRTQQEAEAVASLATRISTLQANSQTQDESVRRVDVGCLDNRGSVKAFAEKFNSGDLGRGSISPDAEPNDKVPETAPVQPKTESDYIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPPPTFLGLPPPPPPPLLDSIPPPPVPGNLLVPPPPVFNAPQGLGWSQVPRGQPTFTKK |
1 | 5yfpB | 0.09 | 0.08 | 3.19 | 1.35 | SPARKS-K | | LKTINPTHSWAQDSSKKESRAYLNDESLSYIRDPLNGQEMSKELQHLPNDSMRLNYLVNSKQFNVKAFLRDMHKQDSFNDLNNSLDRLDSDIQDQSIHLKQLVG----KNFT-KYVKIKNKLDQIYKEFDEKTNEKNQCDSPKENQINVESLNKKVDEVIRTTTFYQKILNYQATKKFIELNKLTNNDFNEFIIESKGLTLRRRFNQSSDTQIENLLVTYKDLIWNSLINSNFNIDQPQETILSLFSKLLNLENFIKNTTSSSNEELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIISDVEPNKVNTISGTSYLNLNCQPPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLDGTYQNSIINEK--------RKENILIGDSNIIESYQKSL--ILKEEQINEVRLKGEEFNLISF-FTSSQSSL-------PSSLDITRSNKDSGSPLDYGFIPPNCNGLSCLRAQLNITTNGIYQLENWQVYETVTFSSKSQDSSKNLTFE |
2 | 2pffB | 0.06 | 0.06 | 2.70 | 1.39 | MapAlign | | FNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARLVGDLIKFSAETLSLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNS---------HLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAALASLADVMSIESLVEVVFYRGMTMQV |
3 | 2nbiA | 0.12 | 0.11 | 3.82 | 1.02 | MUSTER | | PSDLNPSSQPSEPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIE-------------------ECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIE-------------ECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQP-----SSQPSE--------ADVLELCPYDTCFLPFDDSSRPPDCTDPRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSP--GSPPVCSPTMMPSPLPSPTE- |
4 | 6tedQ | 0.06 | 0.05 | 2.38 | 0.70 | CEthreader | | ------------------------------------RGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYEEDQEKRDIAKGHLKKVTEQYPDDVEAEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHSLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREH |
5 | 6gmhQ | 0.06 | 0.05 | 2.41 | 0.95 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAY-----PNNYETMKILGSLYAASEEAWIELAQILEQTLSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAM-------CEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDT |
6 | 3cnfB | 0.09 | 0.09 | 3.27 | 0.80 | FFAS-3D | | GEFEFSGRNEKWDQAL--------YLSEHFPAFSDVPLAGANTIIAIMRLFTPQGFLRTDLAIAANFPRASR-NPQTYIPYTNQRGTVTNEFASRFRTI---------VATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNF--MLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADQTSDAVRQLPTLSTSQIRHAIERIAQLRFLGTLTRSLKQNAQIRRIRPDGTVLRYDDQIDIE------AFRWSRYFLDELQLRRLSVGLRLITNPRIARRFNGVRIMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRNRGMAYPSPTGRPHVNERAGMSKLDILDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEASGEDMRLIY-------PLQPISVARSMRAIVNHNEVD---RPREMDTGTLSRGDLLYSP- |
7 | 6zywY | 0.06 | 0.06 | 2.59 | 1.35 | SPARKS-K | | DCSKEPSVAPLKDLKYSETFHSFHATFETFD--LRTCLRAARTYFLAKGVKEERNLITLNDDEGVPQGYE-LNIDENQQYKDQDFLANLYLSIIIGFNEVMQLITKDYKNMTEEFIQDYIFQKVSKVYAGFQITLDKIQIILEVKIDFKDTISFKLTPYFFMVIEQKNIKSQILNNTVLCYLLLTKEIPYFDNCQNDYSEKIEKMKKRILWEPLGKQISDELPKNRIFVQTGRKSNYGFDIPIMQHELGLRIETQRLGWFILFFKEMKEIQITQKMNHTWLIFKVNITFNSISKDTIALEFTLEQSFFKIKNYFEENQIKYEQESQIAKKQILNNEQFFISYIESKQLMILNQMKDYKNLYEQMQISQAITPVEKRKFAENLIRFGSDNNLRLYKFDLNEMSELTEKSYLSGLLKFASEKKIQNTDVIVASVPHFIN-----TKILIDYFSKSEKIIATKININNIYSNFNKNPVNNVFTYGVEGYSQFLLLDTYNNYLPGAKIYKIMNNILNSITFISE |
8 | 6y07A | 0.13 | 0.03 | 1.13 | 0.44 | CNFpred | | ------------------------------------------------------------------------------IEQIQRKQEEARLKVEEMERKLEAVKEASKRGVSSDQLLNLILDLADIIT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLIQIIEESNEAIKELIKNQKGPTSD-------------------YIIEQIQRDQEEARK-----------------KVEEAEERLERVKEASKRGVSSDQLLDLIRE----------AEIIEELIR------------------------------------------------------------------------------------------------- |
9 | 6rwbA | 0.06 | 0.03 | 1.47 | 0.50 | DEthreader | | --------------------------------------S-Q------------PD-QDL-NVL-TKT------AHANDSSFTLPYDGLNYLALAISEYRLIDIIVLENTLQWMLDITTLQAMLTKQYSTTATPELFN--------------------------------------------------------------NLYRSLANGFHLLSQYVLIAQWAELKLLSEKLLLKNHYI-KL-ILL--VNKINESRRDALVNYYLAKNVSGDEKIK-------------------------EQ-LYQYLLL-DT--------------GH-EVKTSPIAEAISSLQIYINCVNISTHFSSDNFLHGWNSY------NKR--Y-A-------RWAGKELAYIDLRYNKTEFLYWKVECNINGTE-----KTA--------QSKDI-F----------------------AVNIA-------------SVAPLMLAAALDTAPNVFGLADGGS---------- |
10 | 6wmpD1 | 0.07 | 0.07 | 2.82 | 1.29 | MapAlign | | HGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVVCERCGVEVEASMGAEAIRDLLADTDIESEIELLQAECKEKAIKRLRLLETDLYRRVINRNNRLKKLLPDIIVRNEKRMLQEAVDALLDNGRRGRAVTGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPSLRLHECGLPKKMALELFKPFVYSKLRLGGHATTIKQAKRMVELEEAVVWDILETVINEHPVLLNRAPTLHRLGIQAFEPRLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTVESQLEARVTNNILSPASGQPIITPKTANAGYLTRRLVDVRALGRTLAADVVTEKGVVLLEAGTLLDENLVELLDDGRDLARERQVNVGESVGVIAAQSIGEPGTQLTMGLPRVAELFEAR----------------------RPKDAAILSPCDGMVRLGNRDTKEKQRIEIIDKNGHIVEEILLPKSRHLVVFDGEQVSRGDVLADGPTDPHD-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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