Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGEAPSPAPALWDWDYLDRCFARHRVCISFGLWICASSCWIAAHALLLYLRCAQKPRQDQSALCAACCLLTSLCDTVGALLARQLTIQVFTGAYLAAIDLVNFMFILFPVCGSKFKSNSDREARERKRRRQLRASVFALALPLSLGPCWALWVAVPKASATIRGPQRRLLASLLQENTEILGYLLGSVAAFGSWASRIPPLSRIAPPPTLGITTQHEIWRGQMSKPSQSPSRSPSGHWRAAAQRQVLGTEMCRGKTFPSIHLWTRLLSALAGLLYASAIVAHDQHPEYLLRATPWFLTSLGRAALDLAIIFLSCVMKSKMRQALGFAKEARESPDTQALLTCAEKEEENQENLDWVPLTTLSHCKSLRTMTAISRYMELTIEPVQQAGCSATRLPGDGQTSAGDASLQDPPSYPPVQVIRARVSSGSSSEVSSINSDLEWDPEDVNLEGSKENVELLGSQVHQDSVRTAHLSDDD |
1 | 7k65A | 0.07 | 0.07 | 2.89 | 1.00 | SPARKS-K | | STQKVLPFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTML--------RWDCSKSVGLAGVLLVALSVAAGLGLCSLIGIFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIP------------IPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRTKWTLSSFAEKHYAPFLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIREYDFIAAQFKYFSFYNMYIVTQIQHLLYDLHKSFSNMWLHYFRDWLQGLQDAFDSDWETGRIMPNNYKNGSDDGVLAYKLRDKPIDISQLTKQRLVDADGINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLS |
2 | 3rkoD | 0.10 | 0.05 | 1.95 | 1.19 | CNFpred | | --------------------------FAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYALEASIKYTILS-LVYAQSGDLSFVALGK-EPLLLAGFGLMIVGLGFKLSLVPFH------------LWTPDVYQGAPAPVSTFLATASKIAIFGV-VMRLFLYAPVGDSEAIRVVLAI----------------IAFASIIFGNLMALSQ-------TNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSP-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 5xpdA | 0.13 | 0.07 | 2.49 | 2.21 | HHsearch | | ----------------------NLWAFVFGILGNIISFVLFLAPVPTFVRICKKKSTEGFQSLPYVSALFNAMLWIYYAMQKDGTFLLITINAFGCVIETIYIVLFVS---YANKK----------TRISTLK--VLGLLLGFAAVLVCELL--TK-----------------GSTREKVLGGICVGFSVSM-FAAPLSIMRVV-----------------------------------------------VRTRSVEFMPFSLSLFLTINAVTWLFYGLAIK---DFYV-ALPNVLG----AFLGAVQMILYII-FKYYKTPVAQMKKYTCTVCGYIY-NPEDGDPDNGVNPG----------T--------------D---FKD-IPDDWVCPL--------------CGVGKDQFEEV------------------------------------------------------ |
4 | 5xpdA | 0.10 | 0.05 | 2.04 | 0.66 | CEthreader | | ----------------------NLWAFVFGILGNIISFVLFLAPVPTFVRICKKKSTEGFQSLPYVSALFNAMLWIYYAMQKDGTAFLLITINAFGCVIETIYIVLFVSYA----------------NKKTRISTLKVLGLLNFLGFAAIVLVC---------------ELLTKGSTREKVLGGICVGFSVSMFAAPLSIMRVVVRTR-----------------------------------------------SVEFMPFSLSLFLTINAVTWLFYGLAIK--------DFYVALPNVLGAFLGAVQMILYIIFKYYKTPVAQMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEV-------------------------------------------------------------------------------------------------- |
5 | 5xpdA1 | 0.13 | 0.06 | 2.04 | 0.65 | EigenThreader | | ----------------------NLWAFVFGILGNIISFVLFLAPVPTFVRICKKKSTEGFQSLPYVSALFNAMLWIYYAMQKDTAFLLITINAFGCVIETIYIVLFVSY---------ANKKTRISTLKVLGLL--------------------------NFLGFAAIVLVCELLTKGSTREKVLGGICVGFSVSMFAAPLSIMRVVVRTRSVE-----------------------------------------FMP---FSLSLFLTINAVTWLFYGLAIKD--------FYVALPNVLGAFLGAVQMILYIIFKYYK----------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5xpdA | 0.11 | 0.06 | 2.27 | 0.97 | FFAS-3D | | ----------------------NLWAFVFGILGNIISFVLFLAPVPTFVRICKKKSTEGFQSLPYVSALFNAMLWIYAMQKDGTAFLLITINAFGCVIETIYIVLFVSYA--------------NKKTRISTLKVLGLLNFLGFAAIVLVCELLTK---------------------GSTREKVLGGICVGFS--------------------------------------------VSMFAAPLSIMRVVVRTRSVEFMPFSLSLFLTINAVTWLFYGLAIKD--FYVA--LPNVLG----AFLGAVQMILYIIFKYYKTPVAQMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFIPDDWVCPLCGVGK----DQFEEV------------------------------------------------------------------------------------------------ |
7 | 5ezmA | 0.10 | 0.09 | 3.29 | 0.95 | SPARKS-K | | LKYFEKPPFHMWVTVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGA------RAAAFTGLALLAA---------PMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHP-----DASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYVTRDWG----LWRRLHLALGVVVMLVITVPWFYLVSVRNPEF-------------PNFFFIHEHWQRRSGSVFYFLPLVIGGAGIFPKLWTAMRARFR-----PALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIAQK----LTPEMPLYGVQMLDHTLPFYLRHPLMMVGQADELTFGATVEPQRVVPDVDSFTKLWKNGQPAMA |
8 | 7a23M | 0.12 | 0.06 | 2.17 | 1.18 | CNFpred | | ------------------------IDGISLFFVILTTFLIPICILVGEYIIAFL----ICEFLMIAVFCMLDLLLFYVFPESVLIPMFIIIGV-LGSLFMLLAILLILFQTTTDLQILLTTEFS------ERRQIFLWIAFFASFAVKVPMVPVHIWLPEA--------HVEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIY---------------------TLSAIAIIYTSLTT--------QIDLKKIIAYSSVAHMNLVTIGMFSP-----NIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRL------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6r9tA | 0.10 | 0.07 | 2.49 | 0.67 | DEthreader | | -----TSAQQALTGTINS-S---------Q---A--AA--T---DFDTLPPLGDSKWRKNKMDESKHEIHSQVDAITAGTSAVCAVTTISSNLTEMSRGVKLLAALLEDEGG-----------------------S--GRPLLQAAKGLAGAVSELLSAQPPRQLSSQLVACTV---CQEQL-HKQAAASATICVAEQIPLL----------------------------------------------------------------------AAKASVPTIQDQA-AMLSQCAKNLGT----------ETEKCTQDLGNVVSLPGQRDVLASRGTPQDLARASGFSSKLLAAAARA----CNALRELETVRELLENPV--QPINDMSGCLDSVMENSKVLGAISTASKAL--F--AAAQAAYLVGVSDPNSQAGQQGLVEPF-C---T--PT-A-RQFVQSAKVAVDNLSAF--- |
10 | 5xpdA | 0.11 | 0.06 | 2.14 | 0.95 | MapAlign | | -------------------------NLWAFVFGILGNIISFVLFLATFVRICKKKSTEGFQSLPYVSALFNAMLWIYYAMQKGTAFLLITINAFGCVIETIYIVLFVSYA---------------NKKTRISTLKVLGLLNFLGFAAIVLVCEL--------------------LTKGSTREKVLGGICVGFSVSMPLSIMRVVV-----------------------------------------------RTRSVEFMPFSLSLFLTINAVTWLFYGLAI--------KDFYVALPNVLGAFLGAVQMILYIIFKYYKTPVAQMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEV-------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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