>Q2NKJ3 (180 residues) QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAAL GLCPREWASLLDFVQVPGRVVLQFAGPGAQLESSARVDEPMTMFLWTLCTSPSVLRPIVL SFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQFAGPGAQLESSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC |
Prediction | CCSSSHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSCCCCSSSSSSCCHHHHHHHCCCHHHHHHHHHHHCCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCSSSSSSSSSSCCCCCCCCCCCCHHHHSSSCCCCSSSSCCCCCCSSSSSSCCCCCCCCCHHHHCCCC |
Confidence | 912214540151368866778999976543133468999965884499998217999997799899999999961797799995588888898667786099999998335112011675565402778789999646513411772124505998246885215788998624431369 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQFAGPGAQLESSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC |
Prediction | 823100320342154240445644154434144140302033332403020334202110414463152025204340302022425436374464374101100330043320132030204144425544646453045033442401241424130202305447344424434468 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCSSSHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSCCCCSSSSSSCCHHHHHHHCCCHHHHHHHHHHHCCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCSSSSSSSSSSCCCCCCCCCCCCHHHHSSSCCCCSSSSCCCCCCSSSSSSCCCCCCCCCHHHHCCCC QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQFAGPGAQLESSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC | |||||||||||||||||||
1 | 6w6wA | 0.99 | 0.86 | 23.96 | 2.42 | SPARKS-K | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQ-------------FDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
2 | 6w6wA2 | 1.00 | 0.86 | 24.11 | 1.25 | CEthreader | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQF-------------DEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
3 | 6w6wA | 1.00 | 0.86 | 24.11 | 6.35 | HHsearch | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQF-------------DEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
4 | 6w6wA | 0.99 | 0.84 | 23.66 | 1.75 | FFAS-3D | -LFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVL-------------QFDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
5 | 2w78A | 0.11 | 0.09 | 3.24 | 0.67 | DEthreader | IQVLYRPEEVASVDQTISVAEAAD-S---ATMITNGTITED------PGTIA---TATRLVLTPRETPSIT-VVTRQNMDLNN--------IDDMRHTPGITYAVEVLKGATGLTGATNLIRKKPT-H--E--FK-GHVELGAGSWNYRSELDVSRIE-EKTVGYRVVIIFMPQPDRAEE | |||||||||||||
6 | 6w6wA2 | 0.99 | 0.86 | 23.96 | 2.40 | SPARKS-K | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQ-------------FDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
7 | 6w6wA2 | 0.85 | 0.72 | 20.19 | 0.95 | MapAlign | SLQWVCAYCTSICRQGKCTRLGSTC-PTQTAIQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQF-------------DEPMTMFLWTLCTSPSVLIVLSFELE-RKPSKIV-PLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRES------------- | |||||||||||||
8 | 6w6wA | 1.00 | 0.86 | 24.11 | 1.25 | CEthreader | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQF-------------DEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
9 | 3lv8A | 0.12 | 0.12 | 4.13 | 0.45 | MUSTER | KFIVIE---VETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ-DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIGLERELDRIEKMDISFFERARERYLELANSDDSVVMIDAQSIEQVDIRRALQDWLSQV | |||||||||||||
10 | 6w6wA2 | 1.00 | 0.86 | 24.11 | 6.22 | HHsearch | QLFWVCAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQF-------------DEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESE------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |