Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640
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| SS Seq | CCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSCCCCCCCHHHHHHHCCCSSSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHSSSSSSCCCCCCCCSSSSSSSSSSCCCSSSSSSCCCCCSSSSSSCCCCCCCCCHHHCCSSSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCSSCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCSSSSCCCCSSSSSSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSHHHHHHHCCCCSSSSSCCCCSSSSSSCCCCCCCCCCCCCCCHHHHHCCCCCCCSSSSSSSSSSSSSC PMPSNSEDKKDPESLVRYSRLLSYSGAVTGVLNEPAGLYRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPRPCLHSATPSTPQTDPTGPEGPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQGNDDNDQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDGSSCISRRPLELAGCASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSAEILSRTLCEPLVASLWMKLGNTGAMRRCVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSL |
1 | 5m59A | 0.05 | 0.03 | 1.24 | 0.50 | DEthreader | | CTAFLDDG--TEGSRVDFLFYFDGRPLQIIKGTQVWVELSPQDVL---QMLGRAGIIITT--E--Y--------PIESQ----L-V--SK-LVDSLNAEIVLGNV--RNRDEGV--------EWLGY--TYLFVRMLRSPGL--------------------ALEKRLIHALKKSNLLISHESMFSGEF-I---KELAKLLAIEPTAKINVLQAILAIFEI-LKK-----SMLRIELTITPFWILVEDEILFHDVFILRKDLAANEHTVEFTV------------------------------------SVISD-----------------------------------------RFPPHT--------------------------VAAPT--IAPFQELVATPMYEIVSDIGWYNFSHVRPVPLELHIQS---PLSVLQMFGKALQ-PS----------------K----DGRSRGVLMLRYFPVESHLHNFLPDFTLQLSDARII-------V-ASYMTMEM----------------------------FLLSLSHSKLRTILEI----------------TAATE-------------------------ESIQTRRHEEGILKRI-D-------------------------- |
2 | 6w6wA | 0.97 | 0.88 | 24.55 | 3.65 | SPARKS-K | | TELRVSKIRGQRQHVWRYSRLLSYSGAVTGVLNEPAGLYRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPR-------------------PPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQDQ-----KVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDR------RPLELAGCASCLTVQDNWTLELE-------------SLPESSLTDLLSDNFTDSLVSFSAEILSRTLCC-------------------VKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSL |
3 | 6w6wA | 0.93 | 0.83 | 23.22 | 2.16 | MapAlign | | LGLCLAYQQFRGLRRVMRPGVCLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPV-------------------PRPPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPE-----PQDQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFE------KDRRPLELAGCASCLTVQDNWTLELE-------------SLPESSLTDLLSDNFTDSLVSFSAEILSRTLC-------------------CVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATA---------- |
4 | 6w6wA | 0.94 | 0.85 | 23.81 | 1.95 | CEthreader | | LGLCLAYQQFRGLRRVMRPGVCLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPRP-------------------PHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQD-----QKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDR------RPLELAGCASCLTVQDNWTLELES-------------LPESSLTDLLSDNFTDSLVSFSAEILSRTLC-------------------CVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSL |
5 | 1flgA | 0.13 | 0.10 | 3.64 | 0.67 | MUSTER | | -KDVTWEDIANDDKTTGD--VLQYGM------GTHA-----------------QRWSPLK------QVNADNVFKLTPAWSYSFGDEKQRGQE----------SQAIVSDGVIYVTASYSR----------ALD--AKTGKRLWT-----YNHRL--PDDIRPCCDVVNRGAAIYSVV------ALNKNTGKVVWKKKFADH----GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVGRLFARDDTGEEIWMRPFVE----------GHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSAPWQASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFS------GNNELVLFDYKAKDG-------------KIVKATAHADRN----------GFFYVVDRSNGKLQNAFPFVDNITWAS-HIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMGSLRAMDPVSEHLPLWAGVLATAG------NLV-GYFKAFDKELWKFQTGSGIVSPPITWEQEQYLGVTVGYGGAVPLWGGDMADLTRPVAQG-------GSFWVFKL |
6 | 6w6wA | 0.98 | 0.88 | 24.75 | 10.15 | HHsearch | | HVWMTSQS---SRLLVRYSRLLSYSGAVTGVLNEPAGLYRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPRPP-------------------HLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQ-----DQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDR------RPLELAGCASCLTVQDNWTLELES-------------LPESSLTDLLSDNFTDSLVSFSAEILSRTLC-------------------CVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSL |
7 | 6w6wA | 0.98 | 0.87 | 24.45 | 4.35 | FFAS-3D | | --------SQSSRLLVRYSRLLSYSGAVTGVLNEPAGLYRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALIL-------------------PVPRPPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQD-----QKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFE------KDRRPLELAGCASCLTVQDNWTLELE-------------SLPESSLTDLLSDNFTDSLVSFSAEILSRTLCC-------------------VKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSL |
8 | 6w6wA | 0.52 | 0.42 | 12.15 | 1.50 | EigenThreader | | LAYQQFRGLRRVMRPGV----CLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKAL-----------EELAC---KLCPHVLRHHQFLLQLPTLDLLAPPGSPVRN------AHNEILEEPHHCPLQSFPTLATLKEE----------GDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFPAQVLLGVLVASSHKGCLQLRDQSGS---QPL------SDPRL---IGCLVRAEVERDVRSSFPSWKE--------LSMPGFIQKQQARVYVQFFLLPV--------------------PRPPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGT-GWG-----------LPEPQDQKHLIFFGSSVR---WFEFLHPGLIAPGPATP-------MLFEKDRRPLELAGCASCLTVQDNWTLELE----------SLPESSLTDLL----SDNFTDSLVSFSAEILSRTLC------------------CVKLTVAL-ETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATCHIVSVFSLQL |
9 | 5w2lA | 1.00 | 0.21 | 5.91 | 1.46 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQ-----DQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKD------RRPLELAGCASCLTVQDNWTLELESSQDIQDVLDA------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6um1A | 0.08 | 0.05 | 1.84 | 0.50 | DEthreader | | -----------------------FKANKEVPCYAFKHDLNPLIKTSGLRASAAALIFVCACHRDYLESSLSHDVAVHEKEALLCLSALARHSEEQNWE-AV--DGSQRKKHFIVANLG-----PTRENIQLSYS-DGDEC---------------------QKIITNITSAPV----------G--LCDRDAGVGFPE------------SY-C-EEPLECIVYDLSRLA----------GNWYSLDNGWRKYYI----------------------P-LEYVNGSACT--DQRRTTYT-R--NWECVVSFLWT-PSPVDCLSGLSWTAVDTFKRTFYLLPY-P-----GSTVEHNLYNLPLLNDT--------------STQATQYACPPYDLTECSFKTYDLSSLSRYSDNLSPCPPEA------------------RVRDS------YVDG-DLCPD---QIRKKST--------------------------NHLFDLSS--LS---GRAGFLSVCG-------------Q------------TRISVGKASKRLTY----VYEGGSPCP----S-KT-LSYKSVISFV----------------NRPMLISLDKRT-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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