Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC GAAAQPSKPTSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTPGGPASEPAQPPGERSADPPLPALELAQATERPSADAAPPPRAPSEAASPCSDPPDAEPGPGAAKGPPQQKPCMLPVRCVPAPATLRLRAEEPGLRRQLSEEPSPRSSPLLLRRLSVEESGLGLGLGPGRSPHLRRLSRAGPRLLSPDAEELPAAPPPSAVPLEPSEHEWLVRTAGGRWTHQLHGLLLRDRGLAAKRDFMSGFTALHWAAKSGDGEMALQLVEVARRSGAPVDVNARSHGGYTPLHLAALHGHEDAAVLLVVRLGAQVHVRDHSGRRAYQYLRPGSSYALRRLLGDPGLRGTTEPDATGGGSGSLAARRPVQVAATILSSTTSAFLGVLADDLMLQDLARGLKKSSSFSKFLSASPMAPRKKTKIRGGLPAFSEISRRPTPGPLAGLVPSFPPTT |
1 | 4rlvA | 0.11 | 0.11 | 3.80 | 1.08 | EigenThreader | | AVDFTARNGITDRGGQIDAKTRDGLTERGAPLLARTKNGLSPLHAAQGDHKAPVDDVTLDYLTAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVELLVKYGASIQAITESGL-----TPIHVAAFASPDVTNIRGETALHAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLLQHAHPDAATTNGYTPLHISAREG------QVDVASVLLEAGAAH--SLATKKGFTPLHVAAKYGSLDVAKLLLQ------RRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKG-ASPHATAKNGYTIAAKKNQQIASTLLNY----GAETNIVTKQGVTPLHLASQEGHTDVTLLLDKSLHLAAQEDKVNVADILTIVACHYGNVKVNFLLKQGANVNAKTKN---GYTPLHQAAQQGQHGAKPNATTANGNTA |
2 | 5et0A | 0.22 | 0.07 | 2.30 | 1.04 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPIHYAAAKGDLPSLKLLVGHYPEGVNAQTN-NGATPLYLACQEGHLEVTKYLVQE-----CSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWG-------------GTPLHDAAENGELECCQILA----------------------------------------------------------------- |
3 | 5et0A | 0.17 | 0.12 | 4.06 | 0.34 | CEthreader | | ----------------------------------------------------------------------------------------------------------------SMALEQALQAARRGDLDVLRSLHAAGLLDSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYL---SCLQWLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYQGGANSAITT-DTGALPIHYAAAKGDLPSLKLLVGHY-----PEGVNAQTNNGATPLYLACQEGHLEVTKYLVQECSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEISQDLWGGTPLHDAAE--NGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS--- |
4 | 6molA | 0.12 | 0.11 | 3.88 | 1.02 | EigenThreader | | GQDDEVRILMANGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADV----------------------NAQDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAG-----HLEIVEVLLKYGADV--NAVDAAGGTPLHEAARAGHLEIVEVLLKYG------ADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYG-ADVN---AVGTPLHKAARAGHLEIVEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNTPLHLAATMGHLEIVEVLLKYGADVNA-------YDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDKFGKTAF |
5 | 4bszB | 0.24 | 0.08 | 2.34 | 0.95 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLDQEDQDTIILDARAGDLDSLKDIFVSPELLSTCKESESDSTALHMAAANGHIETVRYILETVSRANSAAFVNEVNKTGNTALHWASLNGKLDVVKLLCDEYEADPFIRNKFGHDAIFEENSGKEEVETYFLKKYDVEPED------------------------------------------------------------------------------------------------------ |
6 | 5et0A | 0.18 | 0.12 | 3.95 | 0.92 | SPARKS-K | | -------------------------------------------------------------------------------------SMALEQALQAARRGDLDVLRSLHAAGLLDSLDALPVHHAARS---GKLHCLRYLVEEVALPAVSRARNGATPAHDATGYLSGGCRVQEKDNSGATVLHLAARFGH---------PDQGGANSAITTDTGALPIHYAAAKGD-LPSLKLLVGHYPEGVNAQT-NNGATPLYLACQEGHLEVTKYLVQE-----CSADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFASRGHTKVLSWLLLH------GAEISQDLWGGTDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS------------------------------------- |
7 | 4rlvA | 0.27 | 0.07 | 2.17 | 1.03 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPLHIAAHYGNVNVATLLLNRGAAVDF--TARNGITPLHVASKRGNTNMVKLLLDR------GGQIDAKTRDGLTPLHCAARSGHDQVVELLLERG-APLLARTKNGLSPLHMAAQGDHVECVKHLLQH------------------------------------------------------------------------------------------------------------ |
8 | 5yz0A | 0.06 | 0.04 | 1.77 | 0.67 | DEthreader | | ---TVVQKPRQLCDSQPTSVMLLDFIQHIMKSSPLMFVNVSGIRLIPICEVCSLFLFSKSPAIFGVLT----R-------EWPVVMSRFSQLDEHMGYL---------VSEGHVDLFCRNLATSETVKAVLLLNLM------V--KHILESLDSEDGFIKELFVLRMEAYTQLGAKGDLVPFALLHLLHCLLS------------YT--ALVAAKSVKLQSFFS--QYKK--PICQFLVESLHSSQMTAADVRKQDVA-H-Q-REMALNTLSEIANVFDFPLNRFLRTLQVLLPDLA---AKASPAASALILGLNNRREI--INNFK----YIFSHLVCSSKTEILGSDDYQR-KLLGILAFFN---------------------------------------------------------------IHMKKSLEKFSEIL----------LA |
9 | 4oauC | 0.15 | 0.09 | 3.21 | 0.53 | MapAlign | | ----------------------------------------------------------------------------------------------------------------------------------------------------NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKG-ADVN--ECDFYGFAFMEAAVYGKVKALKFLYKR----GANVNLRRLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAVEAITHLLLDHADVNPLILAVEKKHLGLVQRLLEQIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAAL---- |
10 | 1n11A | 0.18 | 0.14 | 4.68 | 0.81 | MUSTER | | GASNVSNVKVETPL---AARAGHTEVAKY----QNKAKVNAKAKDDQTPRIGHTNMVK---ENNANPNL---------------ATTAGHTPLHIAAREGHVE-----------------TVLALLEKEASQACMTKK-----GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPAVHHNNLDIVKLLLPRGGSPHSPAWNGYT--------PLHIAA--KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK------QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH--VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN-AKTKLGYSPLHQAAQQGHTDIVTLLLK-NGASPNEVSSDGTTPLAIAKRLGYISVTDVLK-VVTDETSFVLHRMSFPETVDE-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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