Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSCCCCCCCHHHCCHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC MAALENGELGPLLSPGTLRGLEDECVTDVKAQTRAALLRVLQEDEEHWGSLEDQPSSLAQDVCELLEEHTERAPRISQEFGERMAHCCLGGLAEFLQSFQQRVERFHENPAVREMLPDTYISKTIALVNCGPPLRALAERLARVGPPESEPAREASASALDHVTRLCHRVVANLLFQELQPHFNKLMRRKWLSSPEALDGIVGTLGAQALALRRMQDEPYQALVAELHRRALVEYVRPLLRGRLRCSSARTRSRVAGRLREDAAQLQRLFRRLESQASWLDAVVPHLAEVMQLEDTPSIQVEVGVLVRDYPDIRQKHVAALLDIRGLRNTAARQEILAVARDLELSEEGALSPPRDRAFFADIPVPRPSFCLSLPLFLGRLPLSRLARPSLACLPRPRPPSLARPRAQR |
1 | 2fji1 | 0.10 | 0.09 | 3.18 | 1.17 | DEthreader | | --------G-SHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEDVFRSTPPHLFLDGTKTCFQMFTQQVEVAAGTNAKILVGVVERFSDLLTKRQKNWISKISEEIKKQNYNDECPGGLVEYLIAVSNDQMKAADYAVAISSYGEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMG-SQAQQIADTLDEYLLDIKQMNSVLFVNFIDNVIGETIIKFLTAL-SFEHSFK-NKN-NKFLEAMKRDFEIFYQLFVKVLKLITQNFTVMEFFMDLSCE-PIDSILDIWQKYLEVYWDSRIDLLVGILKCRDVSSSERKKIVQQATEMLHEYR-NMENVDREPTLMRRFVLEF-E--KQ------------------------------------ |
2 | 5b86A | 0.24 | 0.20 | 6.33 | 1.91 | SPARKS-K | | AQELQGVGLGSLLPPKQIRLLEA-FLSNEVTSVKQL-ARALELESQRWTQDGHCHSELAIDILQIISQGQTKAENITSDVG-QIKQLLLVELAALLRSYQRAFDEFLEKSK----LLRNYRVNI-ANINNCLFFWTSVEQKW----QISHDSLNRLLEPLKDLKAHGFDTLLQSLFLDLKPLFKKFTQTRWANPVETLEEIITTVSSSLPEFSELQDCFREEL-ETVHLHLVKEYIIRLCKRRLVLKTAEQQQQLARHILANADAIQGFCTENGSTATWLHRALP-IAEIIRLQDSSAIKIEVATYATWYPDFSKGHLNAILAIKGNLPSSEVRSIRNIL------DINTGVQEPPRPLFSLIKVT------------------------------------------- |
3 | 2fji1 | 0.11 | 0.09 | 3.30 | 1.76 | MapAlign | | ------------MGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFRSTPPLFLDGTKTCFQMFTQQVEVAAGTQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQTPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKYYEQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYM-GSQAQQIADTLDEYLLDIKQMNSVLFVNFIDNVIGETIIKFLTALSFE-HSF----KNNKFLEAMKRDFEIFYQLFVKVTL-ITQNFTVMEFFMDLSCE-PIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHEYRRNMGVDREPTLMRRFVLEFEKQ--------------------------------------- |
4 | 2fji1 | 0.11 | 0.10 | 3.44 | 1.30 | CEthreader | | ---------GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERGLLFLDGTKTCFQMFTQQVEVAAGTQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHCPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMGS-QAQQIADTLDEYLLDIKPMNSVLFVNFIDNVIGETIIKFLTALSFEH---SFKNKNNKFLEAMKRDFEIFYQLFVKVLDLITQNFTVMEFFMDLSCE-PIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHENMEANGVDREPTLMRRFVLEFEKQ--------------------------------------- |
5 | 5b86A | 0.22 | 0.18 | 5.80 | 1.55 | MUSTER | | AQELQGVGLGSLLP-PKQIRLLEAFLSNEVTSVKQLARALELESQRWTQLDGHCHSELAIDILQIISQGQTKAENITSDVG-QIKQLLLVELAALLRSYQRAFDEFLEKSKLLRN-----YRVNIANINNCLFFWTSVEQKWQ----ISHDSLNRLLEPLKDLKAHGFDTLLQSLFLDLKPLFKKFTQTRWANPVETLEEIITTVSSSLPEFSELQ-DCFREELETVHLHLVKEYIIRLCKRRLVLKTAEQQQQLARHILANADAIQGFCTENGSTATWLHRALP-IAEIIRLQDSSAIKIEVATYATWYPDFSKGHLNAILAIKGNLPSSEVRSIRNILDI------NTGVQEPPRPLFSLIKVT------------------------------------------- |
6 | 5b86A | 0.24 | 0.21 | 6.39 | 5.44 | HHsearch | | SPKLQGVGLGSLLPPKQIRLLEA-FLSNEVTSVKQL-ARALELESQRWTQDGHCHSELAIDILQIISQGQTKAENITSDVG-QIKQLLLVELAALLRSYQRAFDEFLEKS----KLLRNYRVN-IANINNCLFFWTSVEQK---WQI-SHDSLNRLLEPLKDLKAHGFDTLLQSLFLDLKPLFKKFTQTRWANPVETLEEIITTVSSSLPEFSELQDCFREEL-ETVHLHLVKEYIIRLCKRRLVLKTAEQQQQLARHILANADAIQGFCTENGSTATWLHRALP-IAEIIRLQDSSAIKIEVATYATWYPDFSKGHLNAILAIKGNLPSSEVRSIRNILDIN---T--GV-QEPPRPLFSLIKVT------------------------------------------- |
7 | 2fji1 | 0.11 | 0.10 | 3.44 | 2.65 | FFAS-3D | | ---------GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPLDGTKTCFQMFTQQVEVAAGTQAKILVGVVERFSDLLTKRQKNWISKISEEIKSITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVTNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMGS-QAQQIADTLDEYLLDIKPMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKN---KNNKFLEAMKRDFEIFYQLFVKVLDGNESNFTVMEFFMDLSC-EPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHEYRRNNGVDREPTLMRRFVLEFE----------------------------------------- |
8 | 2fji1 | 0.10 | 0.09 | 3.33 | 1.85 | EigenThreader | | ---------GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPLDGTKTCFQMFTQQVEVAAGTQAKILVGVVERFSDLLTKRQKNWISKISEEIKKITPEDECPGGLVEYLIAVSNDQMKAADYAVAISSKYGKLVSNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESLITQNFTVMEFFMDLSCEPIDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHEYRRNMGVDREPTLMRRFVLEFEKQ--------------------------------------- |
9 | 5b86A | 0.24 | 0.21 | 6.40 | 1.96 | CNFpred | | AQELQGVGLGSLLPPKQIRLLEAMFLSNEVTSVKQLMARALELESQRWTQ-GHCHSELAIDILQIISQGQTKAENITSDVGMQIKQLLLVELAALLRSYQRAFDEFLEKS----KLLRNYRVNIMANINNCLFFWTSVEQKWQI----SHDSLNRLLEPLKDLKAHGFDTLLQSLFLDLKPLFKKFTQTRWANPVETLEEIITTVSSSLPEFSELQDCFREELMETVHLHLVKEYIIRLCKRRLVLKTAEQQQQLARHILANADAIQGFCTENGSTATWLHRALPMIAEIIRLQDSSAIKIEVATYATWYPDFSKGHLNAILAIKGNLPSSEVRSIRNILDINTGVQE------PPRPLFSLIKVT------------------------------------------- |
10 | 5yfpC | 0.10 | 0.09 | 3.33 | 1.17 | DEthreader | | IIDIAFDFQLSVIGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFETPPHGLFLDTKTCFQMFTQQVEVAAGT-N-QAKILVGVVERFSDLLTKRQKNWISKISEKKTPEDECPGGLVEYLIAVSNDQMKAADYAVAISSGYEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMG-SQAQQIADTLDEYLLDIKQMNSVLFVNFIDNVIGETIIKFLTALSFEHSFK--NKN-NKFLEAMKRDFEIFYQLFVVLSTLITQNFTVMEFFMDLSCEP-IDSILDIWQKYLEVYWDSRIDLLVGILKCRKDVSSSERKKIVQQATEMLHEY-RNMEADREPTLMRRFVLEF-E--K--Q---------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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