>Q24JP5 (251 residues) VRAVSVEAAVTPAEPYARVLFHLKGQDWPPGSGSLPCARLHAAEGPGGCGSGEENDPGEQ ALPVGGVELRPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRI KVKKGLHVTAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLTEPDSSPLELSEFLWVD FVVENSTGGGVAVTVSERDIRALIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVE VTEHVWLGTDQ |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | VRAVSVEAAVTPAEPYARVLFHLKGQDWPPGSGSLPCARLHAAEGPGGCGSGEENDPGEQALPVGGVELRPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRIKVKKGLHVTAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLTEPDSSPLELSEFLWVDFVVENSTGGGVAVTVSERDIRALIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVWLGTDQ |
Prediction | CSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCSSSSCCCCSSSSSCCCCCCCCCSSSSSSSSCCCCCSSSSSSSSSSCCCCSSSSSSSCCCCCSSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSSCCCSSSSSSCCCCCCSSSSSCCCCCSSSSSSSSSSSSCCCSSSSSSCCCSSSCCC |
Confidence | 91588613336788634766564377766777777763123566788767776678877664235699872898441155359928999659888887089999998289950299999972689589996517987407899724798743389999981578889876540104666776404678659999974834899531576101431002683555678999994597488761432136289 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | VRAVSVEAAVTPAEPYARVLFHLKGQDWPPGSGSLPCARLHAAEGPGGCGSGEENDPGEQALPVGGVELRPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRIKVKKGLHVTAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLTEPDSSPLELSEFLWVDFVVENSTGGGVAVTVSERDIRALIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVWLGTDQ |
Prediction | 54122244403354321302232416426626554413524255454524556455454314431303034464451442523510001024430334120002020346442220102031444030222433445314033434644422201010223343454655432220221122144345332302034630200011155340101030344413100200103462313402543515378 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCSSSSCCCCSSSSSCCCCCCCCCSSSSSSSSCCCCCSSSSSSSSSSCCCCSSSSSSSCCCCCSSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSSCCCSSSSSSCCCCCCSSSSSCCCCCSSSSSSSSSSSSCCCSSSSSSCCCSSSCCC VRAVSVEAAVTPAEPYARVLFHLKGQDWPPGSGSLPCARLHAAEGPGGCGSGEENDPGEQALPVGGVELRPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRIKVKKGLHVTAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLTEPDSSPLELSEFLWVDFVVENSTGGGVAVTVSERDIRALIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVWLGTDQ | |||||||||||||||||||
1 | 3wiqA | 0.06 | 0.04 | 1.78 | 1.04 | CNFpred | ---------------PIGLRIYINREFLNPLKCEILEFKRVLDLKQ--------------GILYRKLRLKDV---KGRITTIEGFRFVSMNN-----KNLIVQKYDVVCENYSAVLNVESFID--ATTVNSKDVRVKHYEIDKKKD---FADGIYLGITTKD------KKYKVGIASSTKVLLNNQRCYFNRFTKDLGYIITENFEVE--------AKQGERYEIEKLTVLVSS----------------- | |||||||||||||
2 | 1hmwA | 0.07 | 0.06 | 2.64 | 1.13 | MapAlign | WNGDYVQ-HLRPAYSFNVRMVSKRTRRSNLLGRYLSDGATNIQLRGPEYTDRPLTKLWGEQGSNDFAGGVSDGVYGASAYALSLQAKKAWFFF----DKEIVCLGGINSNITTTLNQSWLLLHDAIGYYFPEGA---NLSLSTQSQKKDEVSGDVFKLWINHG------ARPENAQYAYIVLPGVQAIFYTAGKLSVAGIEIETDKPCA--VLIKHINGKQVIWAADTAVLSIRDLNRVKIDFPQQE---- | |||||||||||||
3 | 2vo8A | 0.12 | 0.06 | 2.13 | 0.90 | CEthreader | ---------------------------------------------------------------------------------TTVGNSTIKVNDEVQVGSAFEAILGIEGLNGDAEYLFEYNAEA-FILNEITSFNDSLFVKSKEVEPG------KVRILVA---SLGNEIEKDSDLVKVNLTPK--------------ISSELEVLGLTTALVGAGDGNTHDLELSSKEVKINEE---------------- | |||||||||||||
4 | 3k71G4 | 0.08 | 0.06 | 2.56 | 0.73 | EigenThreader | LWMQFIPACREQVVSESNICLYIDKRSKNLLGSRDLQTLDLALDPGRLSPRAETKNRLKAHCENFNLLLPSCVEDSVTLPFEKLGISFSFPSLLVGSNLELNAEVMVWNDGDSYGTTITFSHPAGLSYRY----VAELRSCDSAPVGSQGTWSTSCRI------NHLIFRGGAQITFLATFDVSPKAVLGDRLLLTA---NVSSE---NNT-------PRTSK---------TTFQLELPVK--------- | |||||||||||||
5 | 4uypA | 0.11 | 0.06 | 2.16 | 0.63 | FFAS-3D | -------------------------------------------------------------------------------------LQVDIGSTSGKAGSVVSVPITFTPKSGIYALSFRTNFDPQVTVASIDAENASDFTTYYNNENG------FASMTFEAPVDRARIIDSDGVFATINFKVSDSAKVGELYNITTNSAYTSFYYSGTDEIKNVVYNDGK-----IEVIAL------------------- | |||||||||||||
6 | 5jmdA3 | 0.11 | 0.10 | 3.48 | 0.64 | SPARKS-K | GFFVFRN---SWGMDATQMVVKAGPKGFWHCQPDNGTFEMWFNGKNGSYVYAGEGEVMEQRQTSVTVTLLETTESVTKLWQPEGNIQTLVTENPSYKNFKHRRSVFFVDN---TYFVIVDEVSGSVNLHYQIANSREDMTFLTQFEDGS-----NMKLQCFGPEGMSTAYRKRYKRMNVSFNVKKDNENAV-------RYITVIYPVDAPKF--DAKFKNKTFDENGLEIEVKVNGKKQSLKYKL------ | |||||||||||||
7 | 4d93A | 0.10 | 0.09 | 3.24 | 1.01 | CNFpred | -LLVVGPKFIRAN-QEYTLVISNFNS-------QLSKVDLLLKL-MNRMINFNMPEELTAGNYKITIDGQRGFFHKEAELVY-ISGLIQVDKPVFKPGDTVNFRVILLDT-RVKSVYVTIRDPQRNVIRKWSTAKLGVFESDLQIVPTPMLGVWNISVEVE-----------GEELVSKTFEVKEYVLSTFDVQVMP-QAVNLTIEAN--------YHFGKPVQGVAKVELYLDDKLNQKKELTVYGKGQV | |||||||||||||
8 | 3oqqA | 0.09 | 0.06 | 2.41 | 0.83 | DEthreader | ----YSDSLLVVLRTLTLVAAC--------------LSPVS------------------------ASVTLALGLFYHNTGVVFNVFEYDLKVTECHGKEELLLTLDVRAVGGIPTVLGVVLDGLKYVRITASLILANFAILTVDKAQA---EGTVITLDGLTSLDNDFVREGLPLRAEVRLIGKEGLTGAERDAQLFRELILDTN----------DNVTKGVDSKGVS----------------------- | |||||||||||||
9 | 6f2pA4 | 0.05 | 0.05 | 2.21 | 1.13 | MapAlign | SGMDRAV-QLRPGFGFGLSMFSSRIGNYNNKGWHTGDGTYLYNTDLSQVLQNTTQTANSRSDKSWAGGTDILGQYGVSGMELSLTAKKSWFMF---DD-EIVALGGIASTDETIVENRKLHLASDIGYYFPGGA--AVKGLREARSGDSTLHTRNFMTLWFDHG-----MNPTNGSYSYVLLPNKENSSSAQAVKETQLNVTGINFWND-----EPTTVGLVTSNRKASVMTKETFEISVSDPTQSN---- | |||||||||||||
10 | 1vw1A | 0.10 | 0.09 | 3.43 | 0.56 | MUSTER | NRAPGLYCAGYQGEDTLLVMFYNQQDTLDSYKNASMQGLYIFADMASKDMTPYQQFDTNNVRRV--NNRYAEDYEIPSSVSSRKDYGWGDYYLSMVYNGDIP-TINYKAASSDLKIYISPKL----RIIHNGYEGQKRNQCNLMNKYGKLGDKFIVYTSLGVNPNNSSNKLMFYPVYQYS---NTSGLNQGRLLFHRDTSKVEAWIPGAKRSLTNQNAAIGDDYATDYIFMTDSKGTATDVSGPVEINTAI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |