Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CSSSCCSSSCCHHHHCCHHHHHHHCCSSSSSSSCCCCCCCCCCCCCSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSSSCCCCCCHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHCHHCCCCCCCCCCCCCCCCCCC VQILPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLSSPCDNHASSEQLYFSTPTNHNLFPLNTLEST |
1 | 2oudA | 0.46 | 0.39 | 11.40 | 1.33 | DEthreader | | TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNG-----------------------VETVV--- |
2 | 2oudA | 0.40 | 0.39 | 11.52 | 2.08 | SPARKS-K | | TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMGVETVVKEAAALEHH----- |
3 | 3f81A | 0.34 | 0.28 | 8.43 | 0.95 | MapAlign | | NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEHVTNAFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR-EIGPNDGFLAQLCQLNDRLAKLK------------------------------ |
4 | 2hcmA | 0.26 | 0.22 | 6.74 | 0.75 | CEthreader | | ARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQ--PGPRAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQAILPRE------------------------- |
5 | 2oudA | 0.40 | 0.39 | 11.52 | 1.95 | MUSTER | | TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMGVETVVKEAAALEHH----- |
6 | 2oudA | 0.40 | 0.39 | 11.52 | 1.72 | HHsearch | | TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMGVETVVKEAAALEHH----- |
7 | 2hxpA | 0.81 | 0.66 | 18.49 | 2.52 | FFAS-3D | | -QILPNLYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLR--------------------------------- |
8 | 2oudA | 0.42 | 0.39 | 11.49 | 0.95 | EigenThreader | | TPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPK-----------LMGVETVVKEA |
9 | 4y2eA | 0.99 | 0.82 | 22.86 | 1.58 | CNFpred | | VQILPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHSLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLS------------------------------- |
10 | 3f81A | 0.33 | 0.28 | 8.28 | 1.33 | DEthreader | | NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGNTNNFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR-EIGPNDGFLAQLCQLNDR-LAKGLKP--------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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