>Q16829 (245 residues) MKNQLRGPPARAHMSTSGAAAAGGTRAGSEPGAGSGSGAGTGAGAATGAGAMPCKSAEWL QEELEARGGASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHAD KERFATRCKAATVLLYDEATAEWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQT EYSEHCETNVDSSSSPSSSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSS QPAFP |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MKNQLRGPPARAHMSTSGAAAAGGTRAGSEPGAGSGSGAGTGAGAATGAGAMPCKSAEWLQEELEARGGASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCKAATVLLYDEATAEWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCETNVDSSSSPSSSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFP |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCSSSSSCCCHHHHHHCCCCCCSCCCCCHHHHHHCCCCCCCSSSSCCCHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCSSSSSCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 98766899999888878888888877788987777778776666666778887338999999997468997899988898998645568861035765776502578522121059989999987336787799956998765543331368999999999832995799827869999878375337887778777899866567787777665675011013687555678889998999999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MKNQLRGPPARAHMSTSGAAAAGGTRAGSEPGAGSGSGAGTGAGAATGAGAMPCKSAEWLQEELEARGGASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCKAATVLLYDEATAEWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCETNVDSSSSPSSSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFP |
Prediction | 86444754444444444544453444544424354454454444445537414322053025204746543000000013620351203101113044412532534423033004366235305634523100010321443543332102001200310374326223243315403630252035545444454544344335244143445244563367343334434544236562648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCSSSSSCCCHHHHHHCCCCCCSCCCCCHHHHHHCCCCCCCSSSSCCCHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCSSSSSCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC MKNQLRGPPARAHMSTSGAAAAGGTRAGSEPGAGSGSGAGTGAGAATGAGAMPCKSAEWLQEELEARGGASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCKAATVLLYDEATAEWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCETNVDSSSSPSSSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFP | |||||||||||||||||||
1 | 3tp9A | 0.09 | 0.07 | 2.52 | 0.83 | DEthreader | RRFYDE--AHASPAVEVSGAREADGAIYPHRLLLV---------LLAELGAPERVDLP-PERVRA-WR-EGGVVLDVRPADAFAKRHLA-GSLNIPW-NKSFV-----TWAG-WL--------LP--AD-RPIHLLA-ADAIAP----DVIRALRSI-GI-D----DVVDWTD-P-AAVDRAAPDDVASYANVSEVLWLLDVIPLSKLCRGRSAAVRNV------G-GY------EAWRGKFPVE | |||||||||||||
2 | 1hzmA | 0.52 | 0.33 | 9.44 | 1.19 | SPARKS-K | ---------------------------------MIDTLRPVPFASEM----AISKTVAWLNEQLELGNE-RLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNENTGGESL-LGLLLKKLKDEGCRAFYLEGGFSKFQAEFSLHCETNLDGS---------------------------------------------------- | |||||||||||||
3 | 6h98A | 0.11 | 0.10 | 3.69 | 0.82 | MapAlign | ---LYGYTPEECEQTATRFKENGYNNVSVFHRFHPDWTGNDAFPMDRLEQYNRLVPAEWVNGLISEYDNDTFIVCHAHYRDAYLSGHIPGATDMDTLALESP-------ETWNRRTPEELKKALEEHIASTTVVLYGKFMHPDNADEFPGHIGAIRLAFIMMYAGVDVRVLNGGYQSWTDA--GFISKLVCVRSYPEYIGEVSGYNYIAAAGRIFAECGSDAYHMENYRNHDHTTREYHEI---- | |||||||||||||
4 | 2vswA | 0.28 | 0.16 | 4.73 | 0.54 | CEthreader | -------------------------------------------------MIGTQIVTERLVALLESGT-EKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKV--DIDCSQKVVVYDQSSQDVAS--LSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG--------------------------------------------------------- | |||||||||||||
5 | 1hzmA | 0.54 | 0.34 | 9.78 | 1.11 | MUSTER | -------------------------------------MIDTLRPVPFASEMAISKTVAWLNEQLEL-GNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNENTGGE-SLLGLLLKKLKDEGCRAFYLEGGFSKFQAEFSLHCETNLDGS---------------------------------------------------- | |||||||||||||
6 | 1hzmA | 0.53 | 0.33 | 9.56 | 1.68 | HHsearch | ----------------------------------MI---DTLRPVPFASEMAISKTVAWLNEQLELG-NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNEN-TGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAEFSLHCETNLDGS---------------------------------------------------- | |||||||||||||
7 | 2vswA | 0.28 | 0.15 | 4.62 | 1.68 | FFAS-3D | --------------------------------------------------IGTQIVTERLVALLES-GTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITEL--IQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDC--FLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG--------------------------------------------------------- | |||||||||||||
8 | 1yt8A | 0.13 | 0.11 | 3.81 | 0.90 | EigenThreader | HDRTHLPGSRSTQLVQETDHVASVRGAGWGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWL---GEPGTRVLDFTASANYAKRHIPGAAWV---------------------LRSQLKQALERLGTAERYVLTCGSS----------LLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESLLASPRIDRYRRPYEGTDNPREAQGYLDWEFGLVEQLGRDGTHGFFVIE------ | |||||||||||||
9 | 1hzmA | 0.58 | 0.33 | 9.38 | 1.56 | CNFpred | ------------------------------------------------------KTVAWLNEQLELGN-ERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNEN-TGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAEFSLHCETNLDGS---------------------------------------------------- | |||||||||||||
10 | 6yj5q | 0.13 | 0.09 | 2.96 | 0.83 | DEthreader | KIFDYKRIPGALPIVVVFKGHDNV----------------APYKVTKAR-PELVKSFEDVLAIVEKHAKNEVTFIDARPNGRFTKGHVPGAYSIAFPEVVEN----GKFKSPEEL--KALFASK-GIDGSKPIISMCGSG-VT-------ACVIDLALEIA-GIGSTNAVYDGSWTEWAQAPTKYIVKEE------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |