>Q16674 (131 residues) MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCR FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVD VKTDKWDFYCQ |
Sequence |
20 40 60 80 100 120 | | | | | | MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ |
Prediction | CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCSCCCCCCCCSSSSSSSSSSSCCCCCCSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCCCCCCCCSSSSCCCCCSSSSSSSCCCCSSCCCCCCCCCCC |
Confidence | 96325789999999975155556753134322111088446734548898644259999844027992999999736999972279956743345455378543312457764146642236766553159 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ |
Prediction | 63433333322212100123334444143025333033660431013030233132744430305563302000224664741110124454345442320212342043353247773515175331418 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCSCCCCCCCCSSSSSSSSSSSCCCCCCSSSCCCCCSSSSSSSSCCCCCCSSSSSSCCCCCCCCCCSSSSCCCCCSSSSSSSCCCCSSCCCCCCCCCCC MARSLVCLGVIILLSAFSGPGVRGGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||||||||
1 | 1k0xA | 0.73 | 0.56 | 15.81 | 1.00 | DEthreader | -------------------PK---LAD--RK-LCADQE--CSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDY-YGDLARLGYFPSSIVREDQTLKP-GKVDVK--TDKWDF | |||||||||||||
2 | 1k0xA | 0.99 | 0.82 | 22.88 | 2.40 | SPARKS-K | -----------------------MGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||
3 | 1k0xA | 1.00 | 0.76 | 21.16 | 0.71 | MapAlign | -----------------------------LADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDF--- | |||||||||||||
4 | 1k0xA | 0.99 | 0.82 | 22.88 | 0.51 | CEthreader | -----------------------MGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||
5 | 1k0xA | 0.99 | 0.82 | 22.88 | 2.12 | MUSTER | -----------------------MGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||
6 | 1k0xA | 0.99 | 0.82 | 22.88 | 1.32 | HHsearch | -----------------------MGPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||
7 | 1k0xA | 1.00 | 0.80 | 22.44 | 1.85 | FFAS-3D | --------------------------MPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ | |||||||||||||
8 | 6pbcA3 | 0.15 | 0.14 | 4.62 | 0.85 | EigenThreader | TRAQAEHMLMDLISYYEKHPLYRKMKLR--YPINEEALEKIGTFKCAVKALFDYKAQREDELTFTKSAIIQNVEKQD---GGWWRGDYG-------GKKQLWFPSNYVEEMINPAILEPEREHEGKNNRLF | |||||||||||||
9 | 1i1jA | 1.00 | 0.81 | 22.66 | 1.59 | CNFpred | ------------------------GPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYC- | |||||||||||||
10 | 2dvjA | 0.15 | 0.10 | 3.34 | 0.83 | DEthreader | ----LEFYKIYLTTTLI--V-------G-VI--L--RQ-EE---AEYVRALFDFNGNDEEDLPFKKGDILRIRDKPE---EQWWNAEDS-E------GKRGMIPVPYVEKYRASVSAL-G----------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |