Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHSSSCCCCSSSSSSCCCCCCCCC MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPPPPTTYCPCSIHPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQEDPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHSNYTLPAAETPLALEPSSGPVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEYALQQAADGTIFLVPRGTKMEATD |
1 | 2lz1A | 0.54 | 0.13 | 3.79 | 1.17 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHHHHSHMKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVDFNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIV--------------------------------------------------------------------------------- |
2 | 5hb4B | 0.11 | 0.10 | 3.82 | 1.21 | MapAlign | | -EDGILSHLSLVVDLGKYCNLGHAELTLACLKLLEKIKAIVQLERNGEGETISASLSASIMATLDPALAASGENYRVKLAILDFLYACLRATPDQPTIAHQLLGFHCELSKLGIEPKGPFDMQKSLFHSLLNVLITLTVSEGYLVTLKYRVLRILQLLWKSPLSASLVMDELRATNFLFHMLLREVQIQPQLPWDGQLVTGCEFLLSDASLAYIDYLASRAAIEEIPSPLKDLDLGPCILEGVHYDIRKAQEILALKEE-KVLIEWLTVRNRANLLLTARLNLLQAWANLLLVMIESSTPKMAFLLQALQAILPTFTVGNLIGDKLFQLFQLCLSAISELRSLYYSICYICDAYGSDTTCQAMILLNALVHTS |
3 | 2lz1A | 0.54 | 0.13 | 3.79 | 4.00 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHHHHS------------HMKH-SSRLEAHLTRDELRAKALHIPFPVEKIINLPVVDFNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIV--------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.06 | 0.06 | 2.66 | 0.74 | CEthreader | | NLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5yfpF | 0.05 | 0.05 | 2.23 | 0.78 | EigenThreader | | DLDPLSFDKWVPFLRRALDKNQLDPVIDELENSIEDNFQGLELQLLQDSQMNDKLSKMKLTNFKFMRDESFLAKLNLGEFFQLDDFHDSIMIFQNLNELSVTKLMYPLIWKKNKFTQSLSLHFLQDYFLKILGFLLYDINLNKATEFILVDNNYNSTNEFWDGLMDRLSPYLSYFEEDMIKLKDFLCIYVAILENFKLNIFDDEFQDDFMPLSINDKTLWLYPMTCTLAKKTYSKITAFLDIFNDIVNKKIRSKLESQILVNLDYFIIAAKEFSSSIKYLAESRKLAETKLIELIDSKIIIDLAQFLEMMIFRELTRQFMGLLIMNFEVEPEIRLRKYSRIRQEDAALLLSVSSVEGANGDDVMDSSSIFNS- |
6 | 2lz1A | 0.56 | 0.13 | 3.78 | 0.90 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHSHMKHSSRLEAHLTRDELRAKALHIPFPVEKIINLPVVDFNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLENIV--------------------------------------------------------------------------------- |
7 | 5cqcA | 0.17 | 0.13 | 4.40 | 1.14 | SPARKS-K | | -SIYPPETSW-------EVNKGMNSSRLHKLYSLFFDKAFYLGDDVSV-----------LLTGAYGFQSKKND------QQIFLFR-------PDSDYV--AGYHVDAKSDVNDKLDRRLSEPATFVEMPTDIT-KGVQH----QVLLTISYDPKSKQLTPTVYDSIGRDTYSE---------SLSSYFKGKYRTTCDEQSIEKAIKSTDFTLGKFTAYNTEGNCGSYTFRTIKIYLTVQDIRNLGVVDIESALTEGQLSEFIVALEDYGKLRSQSK-------TAKLTAVELLIGILNDIKSQYDKLVKEVDCLMDS------SLGKLVQFHLKNLGAESLQKLVLPCVKFD-------------------- |
8 | 4eotA | 0.24 | 0.06 | 1.84 | 0.62 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFSDDQLVSMSVRELNRQLR--GFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKL-------------------------------------------- |
9 | 1g8xA | 0.08 | 0.05 | 1.94 | 0.67 | DEthreader | | -------------------------------------TSDSFVKANQRNEPAFHNRVYNVNPFKRIHI-----NQSLLIKTETKKIQ---NQNGGVLQQILQANIEANAKTEKSRVAVKALYRLFLWLVKIN--CSER--------------ELCFKDSS-----DNVVTKLFDPNIA---------A-QYK----------------NNKQEVVLLRVLGITR-FPNRI------------NIDPE-QY-------------RFGITKIFFRGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGVLELKRQKKIAVLLQKYRIKLSNDLLSILAQLTEL------------------ |
10 | 1vt4I3 | 0.05 | 0.05 | 2.45 | 1.00 | MapAlign | | SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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