Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MELCRSLALLGGSLGLMFCLIALSTDFWFEAVGPTHSAHSGLWPTGHGDIISGYIHVTQTFSIMAVLWALVSVSFLVLSCFPSLFPPGHGPLVSTTAAFAAAISMVVAMAVYTSERWDQPPHPQIQTFFSWSFYLGWVSAILLLCTGALSLGAHCGGPRPGYETL |
1 | 6ov2A | 0.16 | 0.15 | 5.01 | 1.33 | DEthreader | | -G-LELLGMTLAVLGWLGTLVSCALPLWKVTAFIAQVVWEGLWMSYDLA-LPQDLQAARALCVIALLLALLGLLVAITGATTEDEGKARIVLTAGVILLLAGILVLIPVCWTAHAIIQDNVAEALKRELGASLYLGWAAAALLMLGGGLLCCT--CP-------- |
2 | 3x29A | 0.16 | 0.15 | 4.84 | 2.17 | SPARKS-K | | -SGLQLLGYFLALGGWVGIIASTALPQWKQSSYAAVGLYEGLWMSCASGQVQGHIQSARALMVVAVLLGFVAMVLSVVGMK-NPTAKSRVAISGGALFLLAGLCTLTAVSWYATLVTQEFFNPSTPYEFGPALFVGWASAGLAMLGGSFLAAT------------ |
3 | 6akfA | 0.14 | 0.13 | 4.53 | 1.21 | MapAlign | | SMGLEITGTSLAVLGWLCTIVCCALPMWRVSAFTAQITWEGLWMNCVVQALPQDLQAARALIVVSILLAAFGLLVALATNAVDETAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFVPEAQKREMGAGLYVGWAAAALQLLGGALLAAS------------ |
4 | 6akfA | 0.14 | 0.13 | 4.53 | 0.98 | CEthreader | | SMGLEITGTSLAVLGWLCTIVCCALPMWRVSAFTAQITWEGLWMNCVVQALPQDLQAARALIVVSILLAAFGLLVALVGAQATNTAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFVPEAQKREMGAGLYVGWAAAALQLLGGALLAAS------------ |
5 | 3x29A | 0.15 | 0.14 | 4.68 | 1.66 | MUSTER | | -SGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGVGLYEGLWMSCASGQVQGHIQSARALMVVAVLLGFVAMVLSVVGMKNP-TAKSRVAISGGALFLLAGLCTLTAVSWYATLVTNPSTPVNARYEFGPALFVGWASAGLAMLGGSFLAAT------------ |
6 | 6akfA | 0.14 | 0.13 | 4.53 | 3.14 | HHsearch | | SMGLEITGTSLAVLGWLCTIVCCALPMWRVSAFIGQITWEGLWMNCVVQQLPQDLQAARALIVVSILLAAFGLLVALVGATNAVQAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFVPEAQKREMGAGLYVGWAAAALQLLGGALLAAS------------ |
7 | 5vhxE | 0.18 | 0.16 | 5.35 | 1.77 | FFAS-3D | | -RGRALLAVALNLLALLFATTAFLTTYWCQGTQRLRRFHTGIWYSCAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLH-SSDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK--------- |
8 | 5vhxE | 0.18 | 0.17 | 5.52 | 1.15 | EigenThreader | | RRGRALLAVALNLLALLFATTAFLTTYWCQGTQRVRRFHTGIWYSLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHS-SDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTK--------- |
9 | 4p79A | 0.18 | 0.16 | 5.33 | 1.14 | CNFpred | | SVAVETFGFFMSALGLLMLGLTLSNSYWRVST---NTIFENLWYSCATD-LSGYVQGCRALMITAILLGFLGLFLGMVGLRATNV-KAKLLAIAGTLHILAGACGMVAISWYAVNITFNPLYAGTKYELGPALYLGWSASLLSILGGICVFSTAA---------- |
10 | 6akfA | 0.14 | 0.13 | 4.53 | 1.33 | DEthreader | | SMGLEITGTSLAVLGWLCTIVCCALPMWRVSAFIAQITWEGLWMNYDSLALPQDLQAARALIVVSILLAAFGLLVALVGAQNAVDAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFVPEAQKREMGAGLYVGWAAAALQLLGGALLAAS------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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