>Q16549 (398 residues) MPKGRQKVPHLDAPLGLPTCLWLELAGLFLLVPWVMGLAGTGGPDGQGTGRLLRRAKRSV HFNDPKYPQQWHLNNRRSPGRDINVTGVWERNVTGRGVTVVVVDDGVEHTIQDIAPNYSP EGSYDLNSNDPDPMPHPDVENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDG PLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRQGFGSIF VVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGGDKMLR SIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATRYE DRRAEWVTNEAGFSHSHQHGFGLLNAWRLVNAAKIWTS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MPKGRQKVPHLDAPLGLPTCLWLELAGLFLLVPWVMGLAGTGGPDGQGTGRLLRRAKRSVHFNDPKYPQQWHLNNRRSPGRDINVTGVWERNVTGRGVTVVVVDDGVEHTIQDIAPNYSPEGSYDLNSNDPDPMPHPDVENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGGDKMLRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATRYEDRRAEWVTNEAGFSHSHQHGFGLLNAWRLVNAAKIWTS |
Prediction | CCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCSSSSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHSCCCCCCCSSSSCCCCSSSSSSSCCCCCCCHHHHHHHHHHHCCCCSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHCCC |
Confidence | 99742246655655555431111124531125223332102466520012356764135898999813335988889874568848998628999991999977998999944520655667813778999988898998999981234555430248997468647897273798759999737999999532132774226778987777678834788999999999999726979999528899999999998767898469999857999817745789871488289988777764113578888999632118534678999999999999699999999999999856147998987400577765578877620069999999985489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MPKGRQKVPHLDAPLGLPTCLWLELAGLFLLVPWVMGLAGTGGPDGQGTGRLLRRAKRSVHFNDPKYPQQWHLNNRRSPGRDINVTGVWERNVTGRGVTVVVVDDGVEHTIQDIAPNYSPEGSYDLNSNDPDPMPHPDVENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGGDKMLRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATRYEDRRAEWVTNEAGFSHSHQHGFGLLNAWRLVNAAKIWTS |
Prediction | 74623651341443231420320322413433433342443442444335442441465140420204300303244333330303401742352640000000000124034024102242100001313113243324431000000000000112312000000120200000000241100000001002121110000000042112001112400330122001310362200000000021454220000020011000000021464431100021020000000213333320220223243312000100100000000000000010222702161024003400541547535234343334221200000210530151066268 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCSSSSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHSCCCCCCCSSSSCCCCSSSSSSSCCCCCCCHHHHHHHHHHHCCCCSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHCCC MPKGRQKVPHLDAPLGLPTCLWLELAGLFLLVPWVMGLAGTGGPDGQGTGRLLRRAKRSVHFNDPKYPQQWHLNNRRSPGRDINVTGVWERNVTGRGVTVVVVDDGVEHTIQDIAPNYSPEGSYDLNSNDPDPMPHPDVENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGGDKMLRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATRYEDRRAEWVTNEAGFSHSHQHGFGLLNAWRLVNAAKIWTS | |||||||||||||||||||
1 | 6hlbA | 0.50 | 0.42 | 12.10 | 1.33 | DEthreader | ---------------------------------------------------------VYQEPTDPKFPQQWYLSGVT-Q-RDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLGEVTDVEARSLGLNP--NHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLR----QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTT | |||||||||||||
2 | 1r64A1 | 0.46 | 0.39 | 11.30 | 2.46 | SPARKS-K | -------------------------------------------------LLPVKEAEDKLSINDPLFERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRLS---DDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSITTEDEAASLI--YGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSS--GSGEYIHSSDI----NGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLENADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWEN | |||||||||||||
3 | 1r64A | 0.45 | 0.38 | 11.02 | 1.08 | MapAlign | -------------------------------LLPVKEAED------------------KLSINDPLFERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPR---LSDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSITTEDEAASLIYGL--DVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCS-AVMAVTYSSGS-GEYIHSSDI-----NGRCSNHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNDGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTW-- | |||||||||||||
4 | 1r64A1 | 0.46 | 0.39 | 11.43 | 0.66 | CEthreader | -------------------------------------------------LLPVKEAEDKLSINDPLFERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPR---LSDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGTTEDEAASLIYGL--DVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGSGE--YIHSSDI----NGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWEN | |||||||||||||
5 | 1p8jA1 | 0.51 | 0.43 | 12.44 | 1.91 | MUSTER | ---------------------------------------------------------VYQEPTDPKFPQQWYLSGVT--QRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDL----RQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTT | |||||||||||||
6 | 3hjrA | 0.26 | 0.23 | 7.13 | 2.03 | HHsearch | --------------------------------------GCAPLTGKEGMDIGRSSTERCLPGANPLQDQQWYLLNSGQAGNDLNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRP-GSKNVVTGSDDPTPTD---PDTAHGTSVSGIIAAV-DNAIGTKGIAPRAQLQGFNLLDDLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPSANSLDQSQLDRLFEQQT--LKAQGAAYIKAAGNGFNKIAARNLDPSNSNFWNLVVSALNADGVRSSYSSVGS-NIFLSATGGEYDTPAMVTTDLPGLDASCDYNVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQP | |||||||||||||
7 | 1p8jA1 | 0.51 | 0.43 | 12.44 | 3.11 | FFAS-3D | -----------------------------------------------------------QEPTDPKFPQQWYLSGVT--QRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDL----RQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTT | |||||||||||||
8 | 1r64A | 0.45 | 0.39 | 11.30 | 1.45 | EigenThreader | -----------------------------------------------LLPVKEAEDKLSINDPLFER--QWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRL---SDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGS-GEYIHSSDIN------GRCSNHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNDGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWEN | |||||||||||||
9 | 1p8jA | 0.51 | 0.43 | 12.44 | 3.49 | CNFpred | ----------------------------------------------------------YQEPTDPKFPQQWYLSGV--TQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLR----QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTT | |||||||||||||
10 | 6hlbA1 | 0.50 | 0.42 | 12.10 | 1.33 | DEthreader | ---------------------------------------------------------VYQEPTDPKFPQQWYLSGVT-Q-RDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLGEVTDVEARSLGLNP--NHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLR----QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |