Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CSSSSHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHCHCHHHHHHCCC GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQFAAPTPVTPPPLSPAFGGTSKIDQYSRILFPVAFAGFNLVYWVVYLSKDTMEVSSSVE |
1 | 7kooA | 0.14 | 0.13 | 4.29 | 1.17 | DEthreader | | LYYGLNLLIPCVLISALALLVFLLPADS-GEKISLGITVLLSLTVFMLLVAEIMPATDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHH--DPDGGKNRRC-------AVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSA-P-NF-------- |
2 | 3jadA2 | 0.53 | 0.42 | 12.07 | 2.13 | SPARKS-K | | GYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARKL-----------------------FISRAKRIDTVSRVAFPLVFLIFNIFYWITYKLV---------- |
3 | 7kooA2 | 0.12 | 0.12 | 4.22 | 0.66 | MapAlign | | LYYGLNLLIPCVLISALALLVFLLPA-DSGEKISLGITVLLSLTVFMLLVAEIMPTSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFVEAVSKD--- |
4 | 7kooA2 | 0.14 | 0.13 | 4.57 | 0.54 | CEthreader | | LYYGLNLLIPCVLISALALLVFLLPADS-GEKISLGITVLLSLTVFMLLVAEIMPATSSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFVEAVSKDF-- |
5 | 3rhwA2 | 0.43 | 0.34 | 10.03 | 2.11 | MUSTER | | SFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIANAGT----TEWNDI----------------SKRVDLISRALFPVLFFVFNILYWSRFGH----------- |
6 | 2m6bA | 0.48 | 0.43 | 12.51 | 2.06 | HHsearch | | GYYLIQLYIPSLLIVILSWISFWINLDAAPARVGLGITTVLTLTTQSSGSRASLPKVSYVKAIDIWLAVCLLFVFSALLEYAAVNFVSRQREFGG-----------------GGFIQRAKKIDKISRIGFPLAFLIFNLFYWIIYKIVRREDEFEHHH |
7 | 3jadA2 | 0.54 | 0.42 | 12.06 | 2.17 | FFAS-3D | | GYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARKLFISR-----------------------AKRIDTVSRVAFPLVFLIFNIFYWITYK------------ |
8 | 7kooA2 | 0.16 | 0.15 | 5.08 | 1.03 | EigenThreader | | LYYGLNLLIPCVLISALALLVFLLPADS-GEKISLGITVLLSLTVFMLLVAEIMPATSSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHNWCAWFLRIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIIC---TIGILMSAPNFVEAVSKD |
9 | 5ojmA | 0.78 | 0.60 | 17.01 | 1.15 | CNFpred | | GYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKS------------------------QPARAAKIDKMSRIVFPILFGTFNLVYWATYL------------ |
10 | 7kooA2 | 0.15 | 0.13 | 4.47 | 1.17 | DEthreader | | LYYGLNLLIPCVLISALALLVFLLPADS-GEKISLGITVLLSLTVFMLLVAEIMPATSSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHH--DPDGGKNR-RC------AVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFVE-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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