Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCCCSCCCCCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSCCCCCCCSSSSSSSSCCCCCSSSSSSSSCC MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
1 | 4xq7A | 0.88 | 0.82 | 22.94 | 1.33 | DEthreader | | -QELYST-PAS--RLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHF--Q-G-QD-VRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSLLDLGLE--DLRMEQRVPDALVFTIQTRGTAEPITVTIVPAS |
2 | 4xq7A1 | 0.99 | 0.81 | 22.66 | 2.08 | SPARKS-K | | ------------------------PHREWKEEVLDAVRTVEEFLRQEHFQGQ-----DVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
3 | 4xq7A | 0.99 | 0.92 | 25.69 | 0.95 | MapAlign | | ------LYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHF-----QGQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
4 | 4xq7A | 0.99 | 0.94 | 26.22 | 0.89 | CEthreader | | ----QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGQ-----DVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
5 | 4xq7A | 0.99 | 0.94 | 26.22 | 1.74 | MUSTER | | ----QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQ-----GQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
6 | 4xq7A1 | 0.99 | 0.81 | 22.66 | 2.37 | HHsearch | | ------------------------PHREWKEEVLDAVRTVEEFLRQEHFQGQ-----DVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
7 | 4xq7A1 | 0.99 | 0.81 | 22.66 | 1.86 | FFAS-3D | | ------------------------PHREWKEEVLDAVRTVEEFLRQEHFQGQ-----DVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
8 | 4m5dA4 | 0.08 | 0.08 | 3.06 | 1.07 | EigenThreader | | RETAELFKSNIFKLQIDELLEQVKLKQKHVLKVEKFLHKLYDILQEIPDWEEKSTNYKFNYKKISLIGSFALKAGQPNGSSIDTLLTMPKDFLNFRCLHKRSVYLAYLTHHLLILLKKDKLDFLQLEYFDNDPLLPILRISCSFYKTRFSINLLIGF |
9 | 4xq7A | 1.00 | 0.94 | 26.39 | 1.69 | CNFpred | | ----QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQG-----QDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPAY |
10 | 4m5dA4 | 0.06 | 0.06 | 2.48 | 1.17 | DEthreader | | -------KSNIFKLQIDELLEQVKLKQKHVLKVEKFLHKLYDILQEIPDWEEFFFNY-KKP-DISLIGSFALKAGIYQGSSIDTLLTMPKLFDFLRCLHKRSVYLAYLTHHLLILLKDKLDSLQLE-YSYFPLLPILRISCSYNFYKRFSINLLIGF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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