Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCSSSSSCCCCCCCCSSSSSSSCCSSSSSSSSSSCCCSSSSCCCCCCCCHHHHHHHHHHCCCCCCCCCCSSSCCCCCCCCC MAKWLNKYFSLGNSKTKSPPQPPRPDYREQRRRGERPSQPPQAVPQASSAASASCGPATASCFSASSGSLPDDSGSTSDLIRAYRAQKERDFEDPYNGPGSSLRKLRAMCRLDYCGGSGEPGGVQRAFSASSASGAAGCCCASSGAGAAASSSSSSGSPHLYRSSSERRPATPAEVRYISPKHRLIKVESAAGGGAGDPLGGACAGGRTWSPTACGGKKLLNKCAASAAEESGAGKKDKVTIADDYSDPFDAKNDLKSKAGKGESAGYMEPYEAQRIMTEFQRQESVRSQHKGIQLYDTPYEPEGQSVDSDSESTVSPRLRESKLPQDDDRPADEYDQPWEWNRVTIPALAAQFNGNEKRQSSPSPSRDRRRQLRAPGGGFKPIKHGSPEFCGILGERVDPAVPLEKQIWYHGAISRGDAENLLRLCKECSYLVRNSQTSKHDYSLSLRSNQGFMHMKLAKTKEKYVLGQNSPPFDSVPEVIHYYTTRKLPIKGAEHLSLLYPVAVRTL |
1 | 7abiA | 0.08 | 0.07 | 2.90 | 1.22 | SPARKS-K | | ISQWGSMWIMMHFKRMRFPPEPPL-DYADNILDVEPLEELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDL--VDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTFPYLYNNLPHHVHLTWYHTPNVVFI------KTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTPRPFNLRSGRRALDIPLVKNWYREHCKVRVSYQKLLKYYVLNALK----------HRPPKAQKKRYLFRSFKATKFFQSTKLD------------WVEVGLQVCRQGYNMLNLLIHR---KNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLG |
2 | 6amvA | 0.32 | 0.07 | 2.01 | 1.90 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASGKLYVSS-ESRFNTLAELVHHHSTVADGL----ITTLHYPAPKRNK |
3 | 1vt4I3 | 0.08 | 0.08 | 3.07 | 1.21 | MapAlign | | --YFYSHI---------GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIDLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
4 | 2hdxA | 0.23 | 0.05 | 1.42 | 1.33 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPLSGYPWFHGMLSRLKAAQLVLEGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAQCRVQ--HLHFQSIFDMLEHFRVHPIPLEGSSDVVLVSYVPS--- |
5 | 1vt4I3 | 0.10 | 0.09 | 3.53 | 0.62 | CEthreader | | ILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 4hnwA | 0.08 | 0.08 | 3.05 | 0.73 | EigenThreader | | SHVDSLALKGLDLYSVGEKDDAASYVANAIRKIESA----SPICCHVLGIYMRNTKEYKESIKWFTAALNNGSTNKQIYRDLATLQSQI--------GDFKNALVSRKKYWEAFLGYRANWTSLAVAQDVNGERQQAINTLSQFEKLAEGKISDSEKYEHSECLMYKNDIMYKAASDNGQLKDA---SIVYRTLIKRNPDNFKYYKLLEVSLGIQGDNKLKKALYGKLEQFYPRCEPPKFIPLTFLQDKEELSKKLREYVLPQLERGVPATFSNVKPLYQRRDYLSGLDPTQDPIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLGLMDTAAGILEEGRQLDLQDRFINCKTVKYFLRA----NNIDKAVEVASLFTKNDDSVNGIKDLHLVEASWFIVEQAEAYYRLYLDRKKKLDDLASEQIANDIKENQWLV------RKYKG-----LALKRFNAIPKFYKQFEDDQLDFHSYCMRKG-----TP |
7 | 2kk6A | 0.31 | 0.07 | 2.02 | 0.78 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHSHMKPLAEQDWYHGAIPRIEAQELLK--KQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTG--FSNIPQLIDHHYTTKQVITKKSGVVLLNPIPKDK- |
8 | 5yfpE | 0.09 | 0.08 | 3.04 | 1.15 | SPARKS-K | | SVELIRRYNDFYSMGKSDIV-------EQLRLSKNWKLNLKSVKLMKNLLILSSK---------LETSSIPKTINTKLVIEKYSEMMENENFNSAYRENNFTKLNEIAIILNN-FNGGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSMQNLIKNESKIVKRVFEEKAIQLFIQRVFAQKIEP--RFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLLEID-DSNQILSTTLEQCFADLFSHYLYDRSKYFG--IEKRSLEAILVDMTSKVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSL-----------------NDVDSMLKCVVESTARVMELIPNKA---HLYILEILKIMFLGIVDSYMEIAEVAYWKICKVDINKTAGVVNLTKFSAILCKQKKKDFVP-KSQELLDQDTLPAIEIVNILNLIFEQSSKFLKLLSHYSHF-QVNSIIIGYQTEDWGVASLRELANLFTVQPELL |
9 | 5gjiA | 0.32 | 0.06 | 1.95 | 1.87 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTKHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDP-LTFSSVVELINHYRNESLAQYNPLDVKLLYPVSK--- |
10 | 6bq1A2 | 0.04 | 0.02 | 1.23 | 0.67 | DEthreader | | QLSLSLSADIHK-D-QPYYDIPVFACGMILQE---------------------------------A-MKWAP----TV-TKSHLQEYLNKHQNWVSGLL--FMASLNLRN----------------YAGEVYGMIRFLN--M--DLHSALHPQHYTQAMFKLTAMLISSKD-------------GKDGVEPFMREMAWHWIDFLVQRFIAK-CSS---DQVEIFSSLLQRSMSNGSMNRHVAAIGP--------------------FPTQGEKRLREDISIMIKFWTAMFSDKK----------------------------------------------------------------------YMKRRTLLLSLRYISLSQWDNNLAWSPLAVLPARFK----------IGNEVTRLVRPGAVSDVP-EAIKFLVTWHTIDADPSVPTDPPTGLSYFS------SMYPPH------------PQIVQALRYDKMGYVREYI------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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