Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCSSSCCCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCSSSSCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCSSSSSSSSSCCCCSSSSCCCCCCCCCCCSSSCCCCCCCHHHHHHHHHHHHHCCCSSSSSSCCSSSSSSCCCCCSSSSCCCCCCCCCCCSCCCCCCSSSSCHHHHHHHHHHHHCCCCCCCCCSSSSSSSSCCCCCCCCCSSSSSSSSHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC MNLEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLEDPQMSMSHPYTMTTPYPSLPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTGTFYACAPPESQAPGVPTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRISHGHTYDASNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCNDRPNKLERDQTCKLFDTQQFLSELQAFAHHGRSLPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQNSGHFLRGYDLPEHISNPEDYHRSIRHSSIQE |
1 | 1qwtA | 0.23 | 0.10 | 3.20 | 0.67 | DEthreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E-NPLKRLVEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEGDRTLPGWPVTLPDPGTRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSE---GHGPGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGEDQPWT-K--RLVMVKVVPTCLRALVEMARVGGASS-----LENTVD-SHPLSLTSDQYKAYQ |
2 | 1qwtA | 0.25 | 0.12 | 3.65 | 3.12 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEGDRTLPGWPVTLPDPTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPTKRLVMVKVVPTCLRALVEMARVGGASSLEN-TVDLHISNSAYLQDLVEGMDFQG |
3 | 3dshA | 0.32 | 0.15 | 4.48 | 1.39 | MapAlign | | ----------------------------------------------------------------------LPDLLISPHML----------------------------------------------------------------------------------------------------------------------------------------------------------------------PLTDLEIKFQYRGRPPRALTISNPHGCRLFYSELFGPISLEQVRFPDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNPPPFEIFFCFGEEWPDKPREKKLITVQVVPVAARLLLEMFSGELSWSADDIRLQISNPDLKDRMVEQFKE---- |
4 | 5bviA | 0.95 | 0.38 | 10.70 | 1.23 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRSAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFDTQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN------------------------------- |
5 | 5bviA | 0.95 | 0.38 | 10.70 | 1.55 | MUSTER | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRSAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFDTQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN------------------------------- |
6 | 1qwtA | 0.25 | 0.12 | 3.71 | 4.38 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENP---------LKR-----LLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVRTLPG-WPVTLPDPGDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPTKRLVMVKVVPTCLRALVEMARVGGASSLENT-VDLHISNSHPLDQYKAYLQDQG |
7 | 5bviA | 0.94 | 0.38 | 10.64 | 2.35 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFDTQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN------------------------------- |
8 | 5bviA | 0.88 | 0.35 | 9.86 | 0.90 | EigenThreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRSAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHTYDVSNLDQVLFPYPDQRKNIEKLLSH---LERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFDTQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN------------------------------- |
9 | 5bviA | 0.95 | 0.38 | 10.70 | 3.55 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRSAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDRPNKLERDQTCKLFDTQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN------------------------------- |
10 | 3dshA | 0.33 | 0.14 | 4.20 | 0.67 | DEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E-QL------------------------------------------------------LP-DLLISPHPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATISLEQVRFPPIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQNTPPPFEIFFCFGEEWPDRKPEKKLITVQVVPVAARLLLEMFSGELSWDDIRL----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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