Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC MATRGHVQDPNDRRLRPIYDYLDNGNNKMAIQQADKLLKKHKDLHCAKVLKAIGLQRTGKQEEAFTLAQEVAALEPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWSPPAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSSRHLRGPHLAKLELIRRLRSQGCNDEYKLG |
1 | 5iwwD | 0.13 | 0.11 | 3.73 | 1.17 | DEthreader | | --------PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDFTFSSVLKACARLGALELGKQIHGYVIKSFEGNVVVYNALIDMYSKCGLLEEARKVFDEM--PE-KDVVTYNTLIDGLCAGKLDEALKLFEEMVEKGIKPDEFTFSSVLKACAR--L------G---ALELGKQIHGYVIKSGFESNVVVYNALIDMYSKCGLLEEARKVF-DEMPE-K---DVVTYNTLIDGLCKAGKLDEALKLFEEMVEGIKPDEFTFSSVLKACARL---G--------------ALELGKQIHGYVIKSG--------FESN-VVVYNALIDMYSKCGLLEEARKV |
2 | 6vp9B1 | 1.00 | 0.95 | 26.55 | 1.51 | SPARKS-K | | ------------RRLRPIYDYLDNGNNKMAIQQADKLLKKHC----AKVLKAIGLQRTGKQEEAFTLAQEVAALEPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWSPPAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSSRHLRGPHLAKLELIRRLRSQGCNDEYKL- |
3 | 3sf4A | 0.08 | 0.07 | 2.83 | 0.61 | MapAlign | | -------EASCLELALEGERLCKSGDCRAGVSFFEAAVQVLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLAQLGAKASGNLGNTLKVLGNFDEAIVCCQRHLDISVGEARALYNLGNVYHAKGALQAAVDFYEENLSLVLGDRAAQGRAFGNLGNTHYL---LGNFRDAVIAHEQRLLIAKEFGDKAERRAYSNLGNAYIFLGEFETASEYYKKTLLLADRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAIGEGRACWSLGNAYTALG--------------------NHDQAMHFAEKHLEISREVGDGELTARLNLSDLQMVLG----------- |
4 | 3sf4A | 0.08 | 0.08 | 2.94 | 0.41 | CEthreader | | ------MEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISVGEARALYNLGNVYHAKGKLQAAVDFYEENLSLVTGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEEGRACWSLGNAYTALGN--------------------HDQAMHFAEKHLEISREVGDK-SGELTARLNLSDLQMVLGLSYST--- |
5 | 1w3bA | 0.13 | 0.12 | 4.29 | 1.24 | MUSTER | | MQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGE-----------IWLAIHHFEKAVTLDP-NFLDAYINLGNVLKEARIFDRAVAAYLRALSLS--PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAETHADSLNNLANIKREIEEAVRLYRKALEVFPEF-------AAAHSNLASVLQQQGKLQEMHYK |
6 | 6vp9B1 | 1.00 | 0.95 | 26.62 | 0.90 | HHsearch | | ------------RRLRPIYDYLDNGNNKMAIQQADKLLKKH----CAKVLKAIGLQRTGKQEEAFTLAQEVAALEPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWSPPAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSSRHLRGPHLAKLELIRRLRSQGCNDEYKL- |
7 | 6vp9B1 | 1.00 | 0.95 | 26.55 | 3.20 | FFAS-3D | | ------------RRLRPIYDYLDNGNNKMAIQQADKLLKKHC----AKVLKAIGLQRTGKQEEAFTLAQEVAALEPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSEIQSRENKCMAMYKKLSRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWSPPAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSSRHLRGPHLAKLELIRRLRSQGCNDEYKL- |
8 | 6gmhQ | 0.11 | 0.10 | 3.55 | 0.87 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTD-IQGALSAYGTATRILQEKVQAD------VPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDK--------------------GNFYEASDWFKEALQIN-------QDHPDAWSLIGNLHLAKQEWGPGQKK |
9 | 6eouA | 0.13 | 0.12 | 4.10 | 1.62 | CNFpred | | --------------LLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG-----------EIWLAIHHFEKAVTLDPN-FLDAYINLGNVLKEARIFDRAVAAYLRALSF--SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAAEDCYNTALRLCHADSLNNLANIKRNIEEAVRLYRKALEVFPE-------FAAAHSNLASVLQQQGKLQEALMH |
10 | 5vchA | 0.07 | 0.06 | 2.61 | 1.17 | DEthreader | | -----VNSDVALKVAATALRLISNASGPQVGVPIEHLPT-SSNERRSILLAISVLVTSPTFDKIIPATVTGLKDSEAVQLAALKCIVLSDEVRYHEQYLPLVIDIIDSAKHIYKATLALDGLLEIIIYLDPLNKLFQ-LETQQSPRAAIVSAIGSCAFAAGSGF-V--P--YFKTSVQYLQQFIQN-LDDIKALTFENISTGVSFAEYAEPLVNAAYEAKTDSLRESGYAFIAN-AKVYGKDFAP-FLQTIIPEIFKTLEKEAAALSELAIASKEH---------------------FLEYVEPSLKVLAEQVNESKETALHSWAIVKAVLLTANLKYYVDASALA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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