Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSHHHHHHHHHHHSSSSCCCCCCCSSSSSSHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCC MSKLPRELTRDLERSLPAVASLGSSLSHSQSLSSHLLPPPEKRRAISDVRRTFCLFVTFDLLFISLLWIIELNTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAGSDNESDEEVAGKK |
1 | 7cgpA | 0.07 | 0.04 | 1.82 | 0.56 | CEthreader | | -----PLQYSLLLQYLVGDKRQPRLLEPGSLGGIPSPAKSEEQKMIEKAMESCAFKAALACVGGFVLGGAFGVFTAGGQ----------RGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAG-----------LKAGAIGCGGFAAFSAAIDYYL-------------------------------------------------------- |
2 | 4o9uB | 0.09 | 0.08 | 3.20 | 0.77 | EigenThreader | | VAILFIVGLKRMAHPTTAKSGIVWAGWGMVLAVLATFFWPAVRVAMTD---MPQMVAIYNGMGGGAAATIAAVGAFEN-------TGLMALAILGGLIGSVAFTGSLIAFAKLQGLMTLGGDMPVAISFYNAFTGMAVGFEGFAVGNPALMVAGTLVGAAGTLLTVLMARAMNRSVWSVLEDAAVMLAYAGDVVNPAARRPGSPLYGMPILDVDGFAGVENELFYAENT |
3 | 5x5yG1 | 0.13 | 0.07 | 2.44 | 0.78 | FFAS-3D | | ---------------------------------------------MVKLDRYIGVFVAILAVLGVILGLALLF-------AFIDELNDISASYGIGDALRFIFLTAPRRAYD----------MLPMAALIGCLVGLGTLALTIMRAAGVIVWAVMKPMLVLMLAGILVGEY-VAPWTENIAQSGRALAQG--------------------------------------- |
4 | 6w1sR | 0.08 | 0.07 | 2.81 | 0.67 | SPARKS-K | | VETIYGNGASVTPLPMNLLLTVHAKMSLIHSIATRVIAHTKSSVALAP-----ALVETYSRL------LVYMEIESLGIKGFISQLLPTGILHTLLEMFSHPHYRVQLLSHLHTLAATNQ-----NQLHLCVESTALRLITALGDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSTWCKDILQTIMNFTPHNWASHTL--SCFPAPLQNVPQESRFNLKKNVEE |
5 | 4he8G | 0.09 | 0.06 | 2.14 | 0.86 | CNFpred | | --------------------------------------------------GLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAA-KDFKTLLAYAGLSHMGVAALGVFSGAMGGLYLLAASGVYTGGLFLLAGRLYERTYRGLAQSAPGLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKA--------------------------------------- |
6 | 2yfaA | 0.08 | 0.06 | 2.37 | 1.00 | DEthreader | | ----------------------------LNKDLTDLRRLQMIANGDYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRL-A-QY-QLISKARQQLLQVRIDVRGYIAEN---SSANEQAALRQLDAALADTDNLKQLPSEDARLQQFENAVLAYRDAVR-QFRDAVANITTSRAEMTVQGADIVKRSDALYQI----------------------------- |
7 | 4o9uB | 0.05 | 0.05 | 2.28 | 0.87 | MapAlign | | AHPTTAKSGIVWAGWGMVLAVLATFFWPGMGNFALILLALLLGSVVAWWAAMPQMVAIYNGMGGGAAATIAAVAFENTGLMALAILGG----LIGSVAFTGSLIAFAKLQLALLFGVIGGGDMPVAISFYNAFTGMAVGFEGFAVGNPALMVAGTLVGGTLLTVLMARAMMALSQAQHKLKELADLLEARGVEVKFAIHPVAGRMPGHMNVLLAEAGVDYDKLKDLEEI |
8 | 5xjjA2 | 0.14 | 0.11 | 3.86 | 0.54 | MUSTER | | LSN--PKLETSV-ETLHYVISSGVAAAVSTRVSNNL-----GAGNPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFSNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSGWQHIGAWNNIFSYYLVGAPVGVYLAFRHDLNGKGLWCGVVIGSTVQATVLAIVTASMNWKEQAEKARKRI--------------------------------------- |
9 | 1vt4I3 | 0.10 | 0.06 | 2.26 | 1.10 | HHsearch | | ---------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLDQYFYSHIGHHLKNIE-HP-----ERMTLFRMVFLDFRFLEQKIRHDSTAWNA------------------SGSILNT----LQQLK------FYKPYICDNDPKYERLVNAILDFLPKI--EE---NLICSKYTDLLRIMAEDEAIEEAHKQRG |
10 | 5do7A | 0.08 | 0.08 | 3.12 | 0.49 | CEthreader | | GVLLRRVTRNLVRNKLAVITRLLQNLIMGLFLLFFVLRVRSNVLKGAIQDRVGLLYQFVGATPYTGMLNAVNLFPVLRAVSDQESKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIISYFTFQKYCSEILVVNEFYGLNFTCAFTQGIQFIEKTCPGATSRFTMN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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