Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCSSCCCCCCCCSCCCSCCCCCSSCCCCCCSSCCCCCHHHHHCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSCCCCCCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCCSSSCSSCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCC NFDQYRKVFTHSSLLNQQEEIDIWGKHHIYDKTSVLFRQVSTLNSYRNVFIGEKNYHCNNSEKTLNQSSSPKNHQENYFLEKQYKCKEFEEVFLQSMHGQEKQEQSYKCNKCVEVCTQSLKHIQHQTIHIRENSYSYNKYDKDLSQSSNLRKQIIHNEEKPYKCEKCGDSLNHSLHLTQHQIIPTEE |
1 | 6tc0C | 0.08 | 0.07 | 2.75 | 0.83 | DEthreader | | VHLISK---VTSFRVLASTACAVYGQKKDL-----CLSS--LGSFLSNILQDCRHLCEP--M--VWPSAKLQRTILEMLLVGIRAGHLYRLT---SQSCRVALFRCLLLLLQHL---SEVAVCQLPCLFALQALAPFG--RLVALLTAFATKCFAGWVTKAAAAD--GFSLLMSDCHVNRVSTLCLF |
2 | 5v3jE | 0.23 | 0.23 | 7.21 | 6.17 | SPARKS-K | | KCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSHTGETPYKCKECGKGFRRGSELARHQRAHSGD |
3 | 5v3jE | 0.23 | 0.23 | 7.21 | 1.16 | MapAlign | | KCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
4 | 5v3jE | 0.25 | 0.25 | 7.64 | 0.95 | CEthreader | | ECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
5 | 5v3jE | 0.25 | 0.25 | 7.64 | 3.59 | MUSTER | | ECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
6 | 5v3jE | 0.25 | 0.25 | 7.64 | 1.99 | HHsearch | | ECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
7 | 5v3jE | 0.25 | 0.25 | 7.64 | 2.05 | FFAS-3D | | -CKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE |
8 | 5v3jE | 0.17 | 0.17 | 5.45 | 0.93 | EigenThreader | | KCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKEKPHKECGKAFRYDTQLSLHLLTHAGAREKPKECGKGFILLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKECGK---SFTCTGDRPHKCKECGKEKPYKECGKTFGRGSELSRHQKIHT-- |
9 | 5v3mC | 0.22 | 0.22 | 6.92 | 9.86 | CNFpred | | KCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGD |
10 | 6bq1A | 0.05 | 0.04 | 2.03 | 0.83 | DEthreader | | GGGGGG-GGGGGGGGGGGGGGGGGGGGGGGG-GGGGG-GGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGG-GGGG--G--GGGKVFDFLHA-LLDYLSGLVDKFPHLLWSIEAKWAPTYIWIDFQREIAKCQVEIFSSLLQRSMSLN------LVVPNATIRNV--R-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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