Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCSSSCCCCCCCCCCCSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSCCHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCSSSSSSCCSSSSCCCCCCCCCCCCHHHHHHHCC GHAGARDIVSIQELIEVEEEEEILLNSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNISQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
1 | 4y97A | 0.77 | 0.50 | 14.25 | 0.83 | DEthreader | | ----------------------------------------------KSM--F-QKLPDIR-LQGCDSNLV-SLFPGQ-------------------------------------DFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVETTPSEGRTFARLYLRRPA-------QSPCIAVQVVR |
2 | 4y97A | 0.65 | 0.65 | 18.47 | 1.41 | SPARKS-K | | LGCPEALTGSYKSMFQKLPDIREVLTCKELGSELKEHYKIEAFTPLLAPADSNGKLNNKSVGDREHSSGAQDLSELEYSLFPGQVVIMEGINTTGRKLVATKPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
3 | 4y97A | 0.62 | 0.61 | 17.57 | 1.29 | MapAlign | | -SMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINGRKLVATKLYEGVPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPGRLTGTFARLYLRRPAADGAERQSPCIAVQVVRI |
4 | 4y97A | 0.64 | 0.64 | 18.27 | 1.16 | CEthreader | | REVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
5 | 4y97A | 0.64 | 0.64 | 18.17 | 0.92 | MUSTER | | SGRGGAGNISLKVL-KLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEGCDSNGKLNNKSVILEGDREHSSGAQIFPGQVVIMEGINTTGRKLVATVPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPCSLGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
6 | 4y97A | 0.66 | 0.64 | 18.25 | 5.66 | HHsearch | | SYKSMFQKLVLTCKI--EELGSELKEHYKIEAFTPQEPGQIGCDSNG-KLN--NKSVILEGDSGAQIPDLSELKEY--SLFPGQVVIMEGINTTGRKLVATKLEGPLPFYQPDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
7 | 4y97A | 0.67 | 0.66 | 18.75 | 1.41 | FFAS-3D | | -FQKLPDIREVLT-CKIEELGSELKEHYKIEAFTPLLAPAQEPNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS--LFPGQVVIMEGINTTGRKLVAGVPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI |
8 | 4y97A | 0.52 | 0.50 | 14.56 | 1.35 | EigenThreader | | TGSYKSMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEGCD--SNGKLNNKSREHSSGAS--------ELKEPGQVVIMEGINTTGRKKLYEGVPLPFYQPTEEDADFEQSVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVVNPGRLVGGTFARLYLRRPAADGAERQSPCIAQVVRI |
9 | 4y97A | 0.77 | 0.49 | 13.84 | 1.95 | CNFpred | | -------------------------------------------------------------------------------LFPGQVVIMEGINTTGRKLVATKL-PFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVS-------EPCSLSIN------------GVIFGLTST |
10 | 3floA | 0.21 | 0.13 | 4.21 | 0.83 | DEthreader | | ----------------------------IVPDS-PTYDK----------------------GRR-------FFLGQI----------------------------------QALEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINEVKPHVLIMFGPFIDITHPLISGKLPPKTLDELFLKFTPILKTISP--HIQTVLIPSTKDASNHAAYPQASLIRKALQL-PKRNFKCMNSNPSEGRSYAQITVQCPDL-----YLHNVARVDLIA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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