Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CSSSSHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC MVMVLSESLSTRGADSIACGTFSRELHTPKKMSQGPTLFSCGIMENDRWRDLDRKCPLQIDQPSTSIWECLPEKDSSLWHREAVTACAVTSLIKDLSISDHNGNPSAPPSKRQCRSLSFSDEMSSCRTSWRPLGSKVWTPVEKRRCYSGGSVQRYSNGFSTMQRSSSFSLPSRANVLSSPCDQAGLHHRFGGQPCQGVPGSAPCGQAGDTWSPDLHPVGGGRLDLQRSLSCSHEQFSFVEYCPPSANSTPASTPELARRSSGLSRSRSQPCVLNDKKVGVKRRRPEEVQEQRPSLDLAKMAQNCQTFSSLSCLSAGTEDCGPQSPFARHVSNTRAWTALLSASGPGGRTPAGTPVPEPLPPSFDDHLACQEDLSCEESDSCALDEDCGRRAEPAAAWRDRGAPGNSLCSLDGELDIEQIEKN |
1 | 7d43P | 0.06 | 0.06 | 2.41 | 1.41 | SPARKS-K | | HTVRFKNELERNITIKLGYANAKIYKLDDPSCPRPE---CYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVD--CPGHDILMATMLNGAAVMDAIAGNESC---PQPQTSEHIEIMKLKHILILVKESQ---AKEQYEQILAFVQGTVAEGAPIIPISAQL----KYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAGGLITKIDPTLCRA-----DRM--VGQVLGAVLPEIFTELESYFLLRRLLGVRTEGDKKAAKVQK-------LSKNEVLMVNIGSLSTGGRVSAVKADLGKIVNPVCTEVGEKIA----LSRRVEKHWRLIGWGQIR------------------ |
2 | 5lqwX | 0.06 | 0.06 | 2.54 | 1.66 | MapAlign | | ----TMILQIDNTPDEATRSAFLSQDTTIHTCLMGSHSIIQVCTAELRHITGKSRYSNWVPPAGIRIVCATSSKTQLIISLELVYFKIDVSDLIELTTHPELDTMPSKVAIVHADLLAIADNEGMIKIMSLQKEDFLTVISLQLVSEKISDMIMVRDLNLHVGLENGV----YMKFHIGDVDGSFTDLISVSLNNEEEEEEEEDDDDEKEEEEINSSGAKMSCVVCHSSS-------------TWVSYTWKNVWTIRQLKDQNMLSCGRLNIGRVSNFPTIDNHSGKKQCRISLQIDSSDHLYKILDDIDCVIIDFKRLLTYKKLSFLHQTEIISPIHAMLKFKNFLLTAMGSTIVLYGLGKKQLLERLAVGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRY--- |
3 | 2nbiA1 | 0.12 | 0.10 | 3.70 | 1.11 | MUSTER | | ---------QPSDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPDCGEVIEECPLDTCFLPTSPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDDVLPTPQNCPACCAFECRPDNPMF----TPSPDGSPPIC----SPTMMPSPEPS------SQPSDCGEVIECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFENPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR------------------------ |
4 | 4uf7A | 0.07 | 0.06 | 2.61 | 0.69 | CEthreader | | YRIPGLYNRTALDERCILNPRLTISSTKFAYVHSEYDKNCTRGFKYYELMTFGEILEGPEKEPRMFSRSFYSPTNAVNYHSCTPIVTVNEGYFLCLECTSSDPLYKANLSNSTFHLVILRHNKDEKIVSMPSFNLSTDQEYVQIIPAEGGGTAESGNLYFPCIGRLLHKRVTHPLCKKSNC---------------------SRTDDESCLKSYYNQGSPQHQVVNCLIRIRNAQRDNPTWDVITVDLTNTYPGSRSRIFGSFSKPMLYQSSVSWHTLLQVAEITDLDKYQLDWLDTPYISRPGGSECPFGNYCPTVCWEGTYNDVYSLTPNNDLFVTVYLKSEQVAENPYFAIFSR--DQILKEFPLDAWISSARTTTISCFMFNNEIWCIAALEITRLNDDIIRPIYYSFWLPTDCRTPY |
5 | 3fbyA | 0.06 | 0.06 | 2.51 | 0.70 | EigenThreader | | ----------------NSAQRFCPDGSPSECHEHRDGSVGWAGNGILCGRDTDLDGFPDEKLRCPER---QCRKDNCVTVPNSGQEDV--------DRDGIGDACDPDADGDGVPNEKDNCPLVRNPDQRNTDEDKWGDACDNCRSQKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNCPRVPNSDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGDVC----QDDFDADKVVDKIDVCPENAEVTLTD---FRAFQTVVLDPEGDAQIDPNMNSDPTVTDDDYAGFIFGYQDSSSFYVVMWKQYWQANPFRAVAEVKSSTGPGEQLRNALWHTGDTE---SQV |
6 | 1w0sA | 0.11 | 0.10 | 3.59 | 0.54 | FFAS-3D | | ------KGLLGGGVSVEDCCLNTAFAYQKRSGGLCQPCRSPRWSLWSTWAPCSVTCSEGSQLRYRRCVGWNGQCSGGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQQVCPTHGAWATWGP--WTPCSA-SCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPPVSPCPVTCGLGQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQH----CPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQGQKLVVEEKRPCLHVPACKDPEEEE----------------------------- |
7 | 5jcss | 0.10 | 0.10 | 3.56 | 1.40 | SPARKS-K | | LSLLEKRELTIPSRGETVKAANGFQLISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEELTHILAQKLTNLIPKLIDSYKNVKSIYMNTKFISLNKAHTRVVSVR---------DLIKLC---------------ERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEP---VLTGKAKMLAKKLTVNVSQQTETGDLLVAVPIQENFETLFNKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEGSLKTIRAGEWLLLDEVNLDTLESI |
8 | 6eqoA | 0.09 | 0.06 | 2.19 | 0.67 | DEthreader | | ------------------------------------------------ICWLIEAWAF--------YDDAAET--W-TGWDASSAFNVDRHVGDEAAMIF---SEVIIPEQYWPVFGGFSDKLSD-----TADGSYMVPFKPSY-------F-GLLDGEVTV------ERSDVMRGVGKAL-----IASALVDSPPRV------------------------------KPKGDPGWITWATEHTYADTYRRW-TQGDFAMSLHGRSDDVI-NV---SGHRIGTEEENVIVIPKAVAVPQ----YRRDELVIIAEHLARK-DV--VVFTGS-SFVAGADIRQ--EIQQFMD----PLSPFDAH-Y-GFAITRCTVSGEFPRSFQLLAEGGRLKM-RALTVKPGTFYAPQV------QAMWDNR |
9 | 1l5gA | 0.08 | 0.07 | 2.86 | 1.16 | MapAlign | | -----DATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQAPCRSQDIDADGQGFCQGGFSIDFTDRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSF----------GYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARP-----VITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVEL--- |
10 | 1zvoC | 0.08 | 0.08 | 3.17 | 1.09 | MUSTER | | RLQLQESGPGLVKPSETTCIVSGGPIRRTGYYPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPPIISGCRHPKDNSPVVACLITGYHPTSVTVT--YMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWSGFSPPNILREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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