>Q13546 (173 residues) VAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYH LYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASH GNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMP |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | VAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMP |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 98788877888789986545678777740155514687787433332599999999868764223322578887754011025666412467876678887776678888767888788886446898776788876578876667788888787788886544589998999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | VAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMP |
Prediction | 77434656544574344044454244341443204414744456545413530464241332043125545553454344545554445144432454553641554735434244244445334424424543422346442344443444435354444431244436548 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMP | |||||||||||||||||||
1 | 3ihbA1 | 0.12 | 0.09 | 3.30 | 0.41 | CEthreader | GETAQYIPVLAEADPDALATPTGRLHC-----------AGDADVEFVTVKDLAVMGACLATGGIHPMTGERMLPSIVARRVVSVMTSSGMYDAAGQWLADVGIPAKSGVAGG-----------------------VLGALPGRVGIGVFSPRLDEVGNSARGVLACRRLSEDF | |||||||||||||
2 | 7czlB1 | 0.05 | 0.05 | 2.24 | 0.43 | EigenThreader | PWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYELATFWSFEGVALAHIVLSGLLFLAACWHWVYWDLELFRDPRTGEP--ALDLPKMFGIHLFLAGLLCFGFGAFHLTGLFGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAHHIAAGIVGIIAGLFHILV | |||||||||||||
3 | 2xd8A | 0.09 | 0.09 | 3.47 | 0.46 | FFAS-3D | -PILGNADKAPPVAEKTIVMDDSAFVYDLDETLAHYELRGEISKKIYALAEKYDRLFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGVSSQGRCAVLNPRQYYALIQDIGSNGLVNRDV---QGSALQSGNGVIEIAGIHSMNIP | |||||||||||||
4 | 5yfpC2 | 0.08 | 0.08 | 3.03 | 1.01 | SPARKS-K | LVAELAEDALETGCPHLLEIHRDFQEQVVVMAKEATEDAQRTVMKLFSRLSGIDKLLDGLTYDIVEMARAEQISLAIDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKNSISEMFGEMREKYVGDQKF | |||||||||||||
5 | 1ls4A | 0.18 | 0.05 | 1.50 | 0.28 | CNFpred | ---------------------------------------------LNSLQSALTNVGHQWQDIATKTQASAQEAWAPVQSALQEAAEKT------------------------------------------------------------------------------------ | |||||||||||||
6 | 6wlbA | 0.03 | 0.02 | 1.40 | 0.83 | DEthreader | ---------------TPYRA-----VIIMRLIILGFFHYRISVICIWFAFSWVLDQFPKW-KP--V--N-R-ETFIERLSAYELDYPVDKVS---TAEFAWRAPEFYHYVSAVRAMILMDPQVG--KDGIQGPMYCVFNR-QALYGTF-T----I-CGFEWGKEISKMHGWRS | |||||||||||||
7 | 4iibA | 0.05 | 0.05 | 2.24 | 0.71 | MapAlign | -VGQTGGVPRLNIGGMCLQDSPLGIRDSDYNSAFPAGVNVAATWDKNLAYLRGQAMGQEFSDVQLGPAAGPLGRSPDGGRNWEGFSPDPALTGVLFAETIKGIQDAGVVATAKHYILNEQEHFRQVAEAAGYGFNISDTISSNVCSYNQINNSYGCQNSYTLNKLLKAELGFQ | |||||||||||||
8 | 4k0mC | 0.10 | 0.09 | 3.43 | 0.72 | MUSTER | LGIDPRRSDQNVRGPHGLKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQA------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
9 | 2pffB | 0.14 | 0.14 | 4.71 | 0.80 | HHsearch | LGFTPGELRSATGHSQGLVTADSWESVTVLFFIGVRCYEAYPNTSLSILEDSLEQVQDYVNKTNSHLPAGKQVEIQSLYGLNLTLRKAKAPSGLDQSRIPSERKLKFSNRFLPV---ASPFHS-HLLVPASINKDLVKNNVSF---NAKDIQIPVYDTFDGRVLSGSISTHIL | |||||||||||||
10 | 5kzwA1 | 0.06 | 0.06 | 2.72 | 0.39 | CEthreader | DPAISSSGPAGSYRPYDEGLRRGVFITNETGQPLIGKVWPGSTAFPDFTNPTALAWWEDMVAEFHDQVIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGTLQAATICASSHQFLSTHYNLHNLYGLTEAIASHRALVKARGTRPFVISRSTFAGHGRYAGHWTGDVWSSW | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |