Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR |
1 | 2yufA | 0.94 | 0.27 | 7.55 | 1.93 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSGEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTSGPS---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2yufA | 0.92 | 0.27 | 7.55 | 1.40 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2yufA | 0.92 | 0.27 | 7.55 | 1.22 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 2yufA | 0.92 | 0.27 | 7.55 | 6.36 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1vt4I | 0.05 | 0.05 | 2.44 | 0.74 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 5ganJ | 0.08 | 0.08 | 3.02 | 0.93 | EigenThreader | | RKADPTNPQGWIASARLEEKARKKIIENGCQECPRSSDIWLENIRLHTLVATAINFNPTSPLLWFKAIDLEKYRVVRKALQEIPRDEGLWKLAVSFEAPQEPEIWIISTLLEERNNPKLVSLLKEGLLELSKNGYKATLSAWLKRAEALNDAPNSHSKVQIAVLKKLIQWDPCDTVLWSRLKMATESYEELLAFFQELLFQTRANMREKSPGLLMMYVSEYWKAQRQTLVLIDQIIDFAPHNLDLRFFKIKLLGRSLQSSLEDFKISGTERLYYKYVNFLRYQDLN-----------EEAIKFLNERCLKSFPICIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDEIDVRARSILDRGLLKNLFYIAKIQMEIRLAELLVTQALQKFPSNALLWVEQIKLFKHGNKSSLKKTIFQDALRRTQNDHRVLLEIG----VSFYAEAQYETSLKWLERALKKCSRYGDTWVWLFRTYARLGKDTV |
7 | 6tgbB | 0.13 | 0.10 | 3.62 | 0.82 | FFAS-3D | | ----IQSSSMDAKLEALKDLASLSTFAQEFINLDGIAFVELMDHGSVAFIKIASFVNKSAIDISILQRSLAILESMNSHDLYQKVAQEITIGQL------------------------------------------------------------------------------------------IPHLQGSDQEIQTYTIAVINALFLKAPDERRQEMANILAQKNEMAHQLYVLQVMDPQDQAQRDIIFELRRIAFDRDYKKEDKHECPFGRSSI-ELTKMLCEIHPMFFTHFEEFFCICIQLLNKT-----WKEMRATSEDFNKVMQVVKTKPSSLDQFKSKLQNILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQDSPNEESPQGEVPHDSLQDKLPVADYDSNCQLNFIAPDKLNALLGKDMMSDLTRNDLRLLDLENIQIPDAPPPIPKEPSNYD |
8 | 5yfpB | 0.09 | 0.08 | 3.21 | 1.00 | SPARKS-K | | KFIELNKFYFNLPKSLKRCLTNNDFNEFIIEYSKGLTLRRRFNQSSDASQSLVIKRIWTQIENLLVTYKDLIWNSLINSN------FNIDQPQETILSLKNTTSSSNENPINELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIIGKDSEGLKSTVEPNKSYLNLNCQPSSQGLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLQNSIINEKRKENILIGD-----------SNIIESYQKSLILKE-------------EQINEVRLKGEEFITSVSQNLIS-FFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYLRYLPKIVEPILKFSTELAQLNITTNGITICRNTLSTIINRCVGAISSTKLRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTEIVTSFQEVSIKTTRDLLFAYEKLPIINGISVV--SYPSKQLLTGIEKDKDNPRNSH |
9 | 4c0oA | 0.11 | 0.06 | 2.16 | 0.82 | CNFpred | | ---------AAVGLLKGTALVLITECLSELCSVQVMALKKLLS-DPTVFLDRLAVIFRHT-QKVIQEIWPVLSETLNKH---------------------------------------------------------------------------------------------------------------ADNRIVERCCRCLRFAVRCV-------GKGSAALLQPLVTQMVNVYHVH----QHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRD----ANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAE----------------------------------------------------------------------------------- |
10 | 6bllA | 0.03 | 0.02 | 1.27 | 0.67 | DEthreader | | -----QAHPPTGL-VAQLYVYRLNRREKLEL-----S-----NVMMLSSVVEYDHDLKTLSVDPGATSMVTMYLFLGSLLLKEVCDS--------WTVIHFLILSRSTMILQIMEL-D---TSGFAT--PTVF-----------QVSPLGIRLLE-NQLHFIP--VA-PIVQC---------------VITLC--LYR-DLSGMFTTP-------------------------------------RL-VFL--VKNFPVGQRV--PLVKEVLLYLLVIYEAFPHDGNL-KV-----RFK-KVPH-IFYGVFICHWVSFYFNRQGER------W-V------TAHYVVATST--NTPCAR--TIERDRYIHPQQEAFQ-WEHVTCMTALIHQMISVILLVDFMVDNAQLGFVYMYLPEAKESFRLLRRADFHVGAHVNT---------------------------------TLDGGIGLTDRVTAH- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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