Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCSSSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCSSSSSSCCCCCSSSSSCCHHHHHHHHHHCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCSCSCSSCCCCCCCCCCHHHCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHCHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSHSRWLRKVKHGHFGWPGWEMGPPGNWSPRPPRAGEARPGPTAESASGPSEDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEEKSSSQPSSCCSDPSKPGGNVEGATQSLAEQMRKIALESEGRPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKHPPPL |
1 | 4uf9A | 1.00 | 0.23 | 6.36 | 1.51 | CNFpred | | --SLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 5xxzA | 0.06 | 0.05 | 2.45 | 1.16 | MapAlign | | KNLLSNAQIHVNETKTTTGLLNGALYVTGKDNYGSISLGNITDTTFDVTVHNLSNKDKTLRYTELLTDHVTLTSRSLRVTDVSQFTKELTKQNGYYLEGFVRFRDSQDDQLNRVNLAVAEESIYYFDDDIVGKHFTGLVTLGSETDNGLHTLGTFKFILEGDNNQDFAAFKGVFLRKYQGLKASVYHASDAELPDGYYHYVVSYYPDVVGAKRQETFDILDRQKPVLSQATFDPETNRFKPEPLKDRGLAGVRKDFYLERKDNKPNKTFVERQADGSFILP--------LDKAKLGDFYYVEDFAGNVAIAKLGDHLPQTLGKTPIKLKLTDGNYQTKETLKDNLETQSDTGLVTNQAQLAVVHRNQPQSQLTDGNKDFVAFKGLENNVYNDLTVNVYAYGITARGSKVPGDYQYVVTYRDEHGKEHQKQYTISVND--- |
3 | 2kkcA | 0.93 | 0.21 | 5.93 | 2.30 | HHsearch | | HMSLTVKAYLLGKEEAAREIRRFSFCFSPEPEA--EAAAGPGPCERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 4xi6A | 0.12 | 0.10 | 3.52 | 0.80 | CEthreader | | -----------------------------------SRVMVEGVGARVVRGPDWKWGKQDGGEVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIK----------------HDGTMCDTCRQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFY---------------------RITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKASQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKV-------- |
5 | 2chnA | 0.09 | 0.08 | 3.05 | 0.80 | EigenThreader | | PPPQKTIDLNGGEEANGLISIGEK---------------GDKSVRKYS------RQIPDHKEGYYLSVN-EKEIVLAGNDYYALQTFAQLLKDGPEVEIKDYPSVRFYGTPWSPKDDPYHSAPNWR----LPYPIHPGQDIKWNKEDRDLLLAKFEKYQLGVRSFAVFFDDISGEGTNQAELLNYIDEKFAQVKPDINQLVCPTEYNKSWSNPNGNNPSIQIWTGDRVISDITRDGISWINERIK-----RPAYIWWN----------FPVSDYVRDHLLLGPVYGNDTTIAKESPAKYDTWQTWKDAIRTILECFAHNSDLGPNGHGYRREESDIQPAAERFLKAFKEGKNYDTFERKESADILLNTENFKLTAEGEEVLKVEGRNESYFLRKYNHVKALQQQVKTATRVIKPLIDRTFATVVKFFNQKF--NAHLDAT |
6 | 2kkcA | 0.95 | 0.21 | 5.99 | 0.90 | FFAS-3D | | M-SLTVKAYLLGKEEAAREIRRFSFCFSPEPE--AEAAAGPGPCERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 2kkcA | 0.91 | 0.21 | 5.81 | 0.94 | SPARKS-K | | HMSLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAG--PGPCERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 4uf8A | 1.00 | 0.23 | 6.36 | 1.50 | CNFpred | | --SLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5xjyA | 0.07 | 0.04 | 1.78 | 0.67 | DEthreader | | GKILYT-----------------NKLEPI------L----NKSMELLDERK-FWA-----------IVFTG--------------------VKYKIRERTNKIKDGYWDIVMSMPFMT--W-----IIIVLWWFLFAVTILQ--CFLIST---F--ANLAAACGGYFYSPVAFGFGCEYFLFNLTT--------------------------PACQCSSDKIKKMLPVCIAKSLKNK--------------------IWVNEFRYKG------TSVDVLSSTSVIFP-----------SPLWDLVRNLFAMAVEGVVFFLITVLQYRFF-GDQGYAHFFAVVGEILVGEKYAGNY---------------------KRKLSTAMALIGGPP---L--PT-GMDPKARRFL-WNCALSVVKEG----LMLQYQSLSSLASQ |
10 | 3fcsA | 0.07 | 0.07 | 2.85 | 1.05 | MapAlign | | RVAIVVGAPTLGPSQEETGG-VFLCPWRQHWNVLEKTEEAEKTPVGSCFLAQPESGRRAEYAGFSSVVTQAGELVLGALGLLAADIFSSYFDGYWGYSVLDSYYQRLHRLRGEQMASYFGHSVAVTDVNGRHDLLVGAPLYMRKLAEVGRLQPRGPHALGTQLYGRFGSAIAPLGDLDRDYNDIAVAAPYGGPSGRGQVLVFLGQSEGLR----------SRPSQVLDSPFPTGSAFGFSLR--GAVDIDDNGYPDLIVGAANQVAVYRAQQAGTTLNLDLGGKHSPICHTTMAFLRDEADFRDKLSPIVLSLNVSLPPTEAGMAPAVVLHGDTHVQEQTRIVLDCGEDDVCVLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEFERLICNQKKENETRVVLCELG--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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