Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCSSCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHSCCCCCC RDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIYTGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGIDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGY |
1 | 6vq6a | 0.57 | 0.56 | 16.03 | 1.33 | DEthreader | | NQTPPTYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRI-LSQKNENEFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIGSSWSVRPFTGNWTEETLL-GS-VLQLNPAI--PGVFGGPYFGIDPIWNIA-TNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKLKPLRFTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHV---RSLAGGLGLFFIFAAFATLTVILLIMEGLSAFLHALRLHWVEFQNKFYTGTGF |
2 | 6xbwa2 | 0.67 | 0.65 | 18.55 | 3.00 | SPARKS-K | | ------YNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDLGHGILMTLFAVWMVLRESRILSQKNENEMFSTIFSGRYIILLMGVFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFDIYNWTEETLRGNPVLQLNPAVTGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHTYFKKPLNIYFGFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLKVKSLAGG--LALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTG- |
3 | 6vq6a | 0.60 | 0.59 | 16.88 | 1.45 | MapAlign | | --TPPTYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVPMFTIGNWTEETLLGSSVLQLNPAIPGVFG-GPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFNIYFGFIPEIIFMSSLFGYLVLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIG--LHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGF |
4 | 6o7ua | 0.48 | 0.45 | 13.14 | 1.10 | CEthreader | | NKLPPTYHRTNKFTQAFQSIVDAYGIATYKEINAGLATVVTFPFMFAIMFGDMGHGFILFLMALFLVLNERKFGAMHR-DEIFDMAFTGRYVLLLMGAFSVYTGLLYNDIFSKSMTIFKSGWQWPSTFRKGESI----------------EAKKTGVYPFGLDFAWHGTDNGLLFSNSYKMKLSILMGYAHMTYSFMFSYINYRAKNSKFNFGDVMIHQVIHTIEFCLNCISHTASYLRLWALSLAHAQLSSVLWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCLVFMEGTSAMLHALRLHWVEAMSKFFEGEGY |
5 | 6o7ua3 | 0.51 | 0.41 | 11.91 | 2.25 | MUSTER | | ------YHRTNKFTQAFQSIVDAYGIATYKEINAGLATVVTFPFMFAIMFGDMGHGFILFLMALFLVLNERKFGAMHR-DEIFDMAFTGRYVLLLMGAFSVYTGLLYNDIFSKSMTIFKSGWQWPSTFRKGE----------------SIEAKKTGVYPFGLDFAWHGTDNGLLFSNSYKMKLSILMGYAHMTYS--------------------------------------TASYLRLWALSLAHAQLSSVLWDMTISNAFSSKNSSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSKFFEGEGY |
6 | 6vq6a | 0.65 | 0.65 | 18.49 | 3.63 | HHsearch | | NQTPPTYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETLLGSSVLQLNPAIPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNSGQIMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGL--GLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGF |
7 | 6xbwa2 | 0.66 | 0.64 | 18.21 | 2.87 | FFAS-3D | | -------NKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDLGHGILMTLFAVWMVLRESRILSQKNENEMFSTIFSGRYIILLMGVFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFDIYNWTEETLRGNPVLQLNPAVTGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLVPWMLLFKPLVFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLKVKSLA--GGLALFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTG- |
8 | 6vq6a | 0.64 | 0.63 | 17.89 | 2.03 | EigenThreader | | QTNQTPYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLR---ESRILSENEMFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETLLGSSVLQLNPAIPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKKFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMV--IHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGF |
9 | 5i1mV | 0.50 | 0.45 | 13.11 | 1.38 | CNFpred | | ---------TNKFTAGFQSICDCYGIAQYREINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKM-KRGEIFDMAFTGRYIILLMGVFSMYTGFLYNDIFSKTMTIFKSGWKWPDHWKKGESIT----------------ATSVGTYPIGLDWAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANHLYFNSM-DFGDIMIHQVIHTIEFCLNCVSHTASYLRLWALSLAHAQLSSVLWTMTIQIAFGFRG--FVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGL |
10 | 6wm2R | 0.57 | 0.55 | 15.95 | 1.33 | DEthreader | | NQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRI-LSQKNENEFSTVFSGRYIILLMGVFSMYTGLIYNDCFSKSLNIGSSWSVRPMFTYNWTEETL-GNP-VLQLNPA-LPGVFGGPYFGIDPIWNIA-TNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKLKPLRFTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSV---KSLAGGLVLFFFFTAFATLTVILLIMEGLSAFLHALRLHWVEFQNKFYSGTGF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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