Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCC MKPPPRRRAAPARYLGEVTGPATWSAREKRQLVRLLQARQGQPEPDATELARELRGRSEAEIRVFLQQLKGRVAREAIQKVHPGGLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSKPPKPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPRTPDPAPEKPSESSAGPSTEEDFAVDFEKIYKYLSSVSRSGRSPELSAAESAVVLDLLMSLPEELPLLPCTALVEHMTETYLRLTAPQPIPAGGSLGPAAEGDGAGSKAPEETPPATEKAEHSELKSPWQAAGICPLNPFLVPLELLGRAATPAR |
1 | 1vt4I3 | 0.07 | 0.07 | 2.69 | 0.61 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 6k15H | 0.08 | 0.06 | 2.53 | 0.73 | EigenThreader | | ISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYLTITAVRR--NVMDVASIVKIHAFLEKW----------GLINYQIDPRTKPKNVY--------------------------------DSAQDFNALQDESRNSRQIH----KVYICHTCGNESINRARDTNLCSRCFQEGHFGANFQSSDFNGNSVKKNWSDQEMLLLLEGIEMYEDHVGKRVEDCIEKFLS--------LPIEDNYIREVVMECVNDAVQTLLQGDDKLGKVSDKSREISEKYIEESQAIIQELVKLTMEKLESKFTKLCDLETQLEMEKLKYVKESEK |
3 | 1ad6A | 0.18 | 0.09 | 2.93 | 0.74 | FFAS-3D | | -----------------------------QQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQR---YKLGVRLYYRVMESMLKSEEERLDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDL----------------------------------------------------SFPWILNVL----------NLKAFDFYKVIESFIKAEGNLT----REMIKHLERCEHRIMESL------------------------------------------------------------------- |
4 | 5wtjA | 0.11 | 0.10 | 3.43 | 0.65 | SPARKS-K | | IEDESENENKQEIYYPKERKNELYIY--KKNLFLNI----GNPNFDYGLISNDIKADAKSEIDAILKNLNDKEYKEKYIKKLKENDDFFAKNQNKNYKSFEKDYNRVSEYKKNYLNKIESYLIDINWKLAIQARGLRELGIIKLSGYNTGISRYPKRNGSDGFYTTTAYKFFDEEGIDLSENSEINKPENES----------------IRNYISYIVRN----PFADYSIAEQIDRVSNLLSYSTRYN-NSTYASVFEVFKDVNLDYDELKKKFKLIGNNDILE--RLKPKKVSVLE------------------LESYNLIIELLTKIE---- |
5 | 2h4mA | 0.12 | 0.06 | 2.23 | 0.67 | CNFpred | | --------------------------IVALDLLSGLAEGLGG-SNILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQHVKP--------------CIADFMPILGTNLNPEFISVCNNATWAIGEISIQM----------------GIEMQP--------------------------------------------------YIPMVLHQLVEIINRPTPKTLLENTAITIGRLGYVCPQEVA--MLQQFIRPWCTSLRNIRDNEEKDS----------------------------------------------AFRGICTMISVNPSGVI |
6 | 5tsiA | 0.08 | 0.05 | 2.15 | 0.67 | DEthreader | | -------------MQRSPEDAQAPSQDAADILAERLEKEWDRERAMARCYIKP---FAGLHLGMQIRIALFSIIYKKTLK--S--LDK-ISTGQLVSLMAN-K---ALSHKMRYSYTRQLPGSIQMWYDTMRLIWKIEEFSKEEYKLTAGELVSQTDAP-TH-A-----------------------RYSNNK-TITISKKLH------------------------------K--ATIDDMLPLLMFDFVQLTVFIVMRKYFLFFRADILFVFTLAIAVGTNQ-D-KPGEIGIIICLAMLILGTFQWC--V-ATSIAVD-------------- |
7 | 6fb3A | 0.06 | 0.06 | 2.61 | 0.97 | MapAlign | | --GFSCTIRYRKIGPLVDKQIYRFSEEGMVNARFDYTYHDNSFRIASIKPIISETPLPVDLYFGVIYYDINQIITTVMTLSKHFDTHGRIKEVQYEMFRSLMELKTKYTYDYDGDGQLQSVAVNDPTWRYSYDLNGNLHLLNPGNSVRLMPLRYDLRDRITRLGDIPYKIDDDGFLCQRGSDVFEYNSKGLLTRAYNKANGWNVQYRYDGRRASCKTNLGHHLQYFYADVTHVYNHSNSEITSLYYDLQGHLFAMESSSGEEYYVASDNTGTPLAVFSINGLMIKQLQYTAYGEIYYDSNPDFQLVIGFHGGLYDPLTKLVHFTQRDYDVLAGR |
8 | 2nbiA1 | 0.11 | 0.11 | 3.88 | 0.62 | MUSTER | | SDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIE--------QCPIDECFLPYGDSSRPLDCTDPAVNRPDCLPTINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSAR-PPDCTAVGRPDCNVLPFPNN |
9 | 2uxxB | 0.12 | 0.03 | 0.94 | 0.98 | HHsearch | | YRLPEV----------IQKCNARWTTEEQLLAVQAIRKYG----RDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEA-----E---H------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 5hy7A | 0.07 | 0.07 | 3.02 | 0.56 | CEthreader | | TAAPSSLLIMSMEDSTGGTTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPTKLFQVTVQNQTCVLALSSRPWLGYTAPITRNFVMTPLSYTELGYTWSFNSEQCQEGMANYLRIFTIEKLGQTMIQKSCPLTYTPKRLVKHPEQPYFYVIEADNNTLPPELVLPPEDFGYPKARGRWASCIEIVDPVSEEQPRVLKRIELEGNEAAVVPFASQDGESFLIVGTGKDMVLNPRASTEGAIHVYRFIDDGRDLEFIHKTIIEEPPLAFCPFQGRLLAGIGKMLRIYDLGLKQLLRKAQAEVSPQLIVSLDTRHNRIVVGDVQHGMTYVVY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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