>Q13268 (280 residues) MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDG AHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCS AGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVV ALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHH QLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAGYSTRL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAGYSTRL |
Prediction | CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHCCSSSSSSCCHHHHHHHHHHHHHHCCSSSSSSCCCCCHHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCSSSSSCCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCSCCHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCSSSSCCCCCCC |
Confidence | 9864122313554677676766566775424577997999929997599999999999099499973899999999999997099699998899999999999999999929987999689899988771019999999999998089999999999999983993999766110388987289999999999999999999710494798862288277246653489999999997399989919899999999972710068788289978782569 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAGYSTRL |
Prediction | 7243134023121234243434244542543430640000001013200200042017340200000145730440053047340402103030344620440053017522400000000011444320250436203300200030002001200410474400000001100332233101300010001100210031116540000000012030400541363661154027412031304042002000000033032102000301423035 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHCCSSSSSSCCHHHHHHHHHHHHHHCCSSSSSSCCCCCHHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCSSSSSCCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCSCCHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCSSSSCCCCCCC MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAGYSTRL | |||||||||||||||||||
1 | 4fc6A | 0.27 | 0.25 | 7.58 | 1.50 | DEthreader | -------------------PPP-AYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGTGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT | |||||||||||||
2 | 3awdA | 0.28 | 0.25 | 7.75 | 1.62 | SPARKS-K | --------------------------MYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQQGVIVAIGSMSGLIVPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW | |||||||||||||
3 | 6xnbA | 0.31 | 0.27 | 8.21 | 0.42 | MapAlign | -----------------------------AQYDVAGRSAIVTGGGSGIGRAIALTLAASGAAVLVTDLNEENANAVVAEISAAGGTARALAGDVTDPAFAEASVAAANELA-PLRIAVNNAGIGGAAAPVGDYPLDSWRKVIEVNLNAVFYGMQAQLDAIGANGGAIVNMASILGSVGFANYSAYVTAKHALLGLTQNAALEYAGKNVRVVAVGPGFIRTPLVASNM-DADTLAFLEGKHALGRLGEPEEVASLVAFLASDAASFITGSYHLVDGGYT-- | |||||||||||||
4 | 6xnbA | 0.30 | 0.27 | 8.22 | 0.23 | CEthreader | ----------------------------MAQYDVAGRSAIVTGGGSGIGRAIALTLAASGAAVLVTDLNEENANAVVAEISAAGGTARALAGDVTDPAFAEASVAAANELA-PLRIAVNNAGIGGAAAPVGDYPLDSWRKVIEVNLNAVFYGMQAQLDAIGANGGAIVNMASILGSVGFANYSAYVTAKHALLGLTQNAALEYAGKNVRVVAVGPGFIRTPLVASNM-DADTLAFLEGKHALGRLGEPEEVASLVAFLASDAASFITGSYHLVDGGYTAQ | |||||||||||||
5 | 2zatA | 0.60 | 0.53 | 15.26 | 1.41 | MUSTER | -------------------------------KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR | |||||||||||||
6 | 3awdA | 0.28 | 0.25 | 7.75 | 0.66 | HHsearch | --------------------------MYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQQGVIVAIGSMSGLIVNQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW | |||||||||||||
7 | 2zatA | 0.61 | 0.54 | 15.45 | 2.87 | FFAS-3D | --------------------------------PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTSRL | |||||||||||||
8 | 1g0oC | 0.25 | 0.24 | 7.51 | 0.53 | EigenThreader | ---------AVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYASTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV-TPEEFDRVFTINTRGQFFVAREAYKHLE-IGGRLILMGSITGQAKAVKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIVDEYAAVQWSLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM- | |||||||||||||
9 | 2zatA | 0.60 | 0.53 | 15.26 | 1.99 | CNFpred | -------------------------------KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR | |||||||||||||
10 | 4nbrA | 0.26 | 0.24 | 7.39 | 1.50 | DEthreader | ---------------HMELTEI-TPESLRLRPSHKERNVLITGAARGIGRAIAQAFVERSATVGICDLNLADVARTCEELNGLGGRAVPIACDVSDYDALVAAIDDT-G-LV-FDTVVNNAGISPKAHKVWEMAPDEWRRVVDVNLTGTFNTIRALTPGMVARRGWIVNTSSVAGKTYSPVACHYAATKSAIIGFTKHLAAELGPYSIRVNAMAPGRIATPMVAG-VA-PEVNAEQVKLTPMARLGQPAEVADVALWLTSTESSFVTGQTVDVAGGLYMA | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |