>Q13214 (272 residues) DSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVGQICRNDVGG QRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQ GSAVCVYSMNDVRRAFLGPFAHKEGPMHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFP DDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAADRVAAADGHYDVLFIGTDVG TVLKVISVPKGSRPSAEGLLLEELHVFEDSAA |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | DSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGPMHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAADRVAAADGHYDVLFIGTDVGTVLKVISVPKGSRPSAEGLLLEELHVFEDSAA |
Prediction | CCCCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSCCCCSSSSSSSSSSCCCCCCCCCCCHHHHHHSSSCCCCCCCCCSSSSSSCCCCCCCCCSSSSSSSHHHHHHHHCCCCCSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCSSSSSCCCCSSSSSSSSSSSCCCCCSSSSSSSCCCCSSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCC |
Confidence | 93112798236899852577889988999998601114666676222200110378888861013412136778798368998888303443212551578998757999973898998733899845999999971874111168766312588889989888888776655786779836765666377776766678986369982577308899999995389848999998399769999982799887632399999743699899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | DSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGPMHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAADRVAAADGHYDVLFIGTDVGTVLKVISVPKGSRPSAEGLLLEELHVFEDSAA |
Prediction | 85522540300100203446646211000001031333554244211220030133441244314530100110303021436635221420330231356444311000000034433410000003163035104130343544534134154512413434144642542523451346105103512023530432443000113345230110002304156330100000044120100000244444433100000041155878 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSCCCCSSSSSSSSSSCCCCCCCCCCCHHHHHHSSSCCCCCCCCCSSSSSSCCCCCCCCCSSSSSSSHHHHHHHHCCCCCSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCSSSSSCCCCSSSSSSSSSSSCCCCCSSSSSSSCCCCSSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCC DSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGPMHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAADRVAAADGHYDVLFIGTDVGTVLKVISVPKGSRPSAEGLLLEELHVFEDSAA | |||||||||||||||||||
1 | 1q47B | 0.62 | 0.61 | 17.57 | 1.50 | DEthreader | HDSRLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSG-KATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKE-TWHDLEEVLLEEMTVFREPT | |||||||||||||
2 | 1q47B | 0.66 | 0.65 | 18.67 | 3.55 | SPARKS-K | DSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAID-GEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTT | |||||||||||||
3 | 6fkkA | 0.36 | 0.33 | 9.95 | 1.26 | MapAlign | --KQLNQPDFVGAIER-------NGYVLFFFRELSMEV-MNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVP-GEFPFYFDEIQAISIVESG--SKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVREQVPKPRPGQCVE-------DSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHQVKSSGAYYDVIYSGTDDGKVTKFINILSTTVDRLKTVVISEMQVLPLG-- | |||||||||||||
4 | 6fkkA | 0.35 | 0.33 | 9.87 | 0.92 | CEthreader | DLKQLNQPDFVGAIE-------RNGYVLFFFRELSMEV-MNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEF-PFYFDEIQAISPIVESG-SKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVREQVPKPRPGQCVE-------DSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSGAYYDVIYSGTDDGKVTKFINILSTHPDRLKTVVISEMQVLPLGTP | |||||||||||||
5 | 1q47B | 0.66 | 0.65 | 18.67 | 2.58 | MUSTER | DSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDG-EHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTT | |||||||||||||
6 | 1q47B | 0.66 | 0.65 | 18.67 | 2.92 | HHsearch | DSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDG-EHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTT | |||||||||||||
7 | 1q47B | 0.66 | 0.65 | 18.67 | 2.52 | FFAS-3D | DSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEH-SGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTT | |||||||||||||
8 | 6fkkA | 0.26 | 0.23 | 7.15 | 1.10 | EigenThreader | QYDLKQLNQPDFVGN---------GYLFFFRELSME--VMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSG---EFPFYFDEIQAISESG-------SIYAVFTTS--VNAIPGSAVCAFDDILAAFDGEFKSQKDSQ------SHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVYSGTDDGKVTKFINIHPNSTVDRKTVVISEMQVLPLGTP | |||||||||||||
9 | 4gz8A | 0.67 | 0.65 | 18.44 | 5.96 | CNFpred | DSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDG--HSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPGIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVP------LEEVLLEEMTVFREPTT | |||||||||||||
10 | 1olzA | 0.36 | 0.34 | 10.18 | 1.33 | DEthreader | YAIPLNEPSFVFADVIRKS-PGEDDRVYFFFTEVSVEYE-FVFRVLIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRPDS--GLVFNVLRDVFVLRSPGLKVPVFYALFTPQLNNVGLSAVCAYNLSTAEEVFSGKYMQSTTVTKWVRYNGPVPKPR-PGACIDSARANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKK-D-VNYTQIVVDRTQALDTVYDVMFVSTDRGALHKAISL------EHAVHIIEETQLFQDFE- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |