>Q13214 (269 residues) MGRAGAAAVIPGLALLWAVGLGSAAPSPPRLALHRCAAHGRVCTECCLARDPYCAWDGVA CTRFQPSAKRRFRRQDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQAR VEWTFQRAGVTAHTQVLAEERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSL HVLSATQAERLARAEEAAPAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLP LESRRKGRNRRTHAPEPRAERGPRSATHW |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MGRAGAAAVIPGLALLWAVGLGSAAPSPPRLALHRCAAHGRVCTECCLARDPYCAWDGVACTRFQPSAKRRFRRQDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQARVEWTFQRAGVTAHTQVLAEERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSLHVLSATQAERLARAEEAAPAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLPLESRRKGRNRRTHAPEPRAERGPRSATHW |
Prediction | CCCCCHHHHCCCCCCCSSSSSSSCCCCSSSSSHHHCCCCCCHHHHHHHCCCCCCCCCCCCCSSSCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSCCCSSSSSSCCHHHCSSSSSSSSSCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSSCCCCCCCCCCSSCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 98754111157632010244441577169998122323233167788615986322577532322576543122145557723326655554444431135532751698712699997799997895556655301476366238805997568100769999997177448999999999368755554456666788998852002375022147887532202304545322455500123444555688877667798533579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MGRAGAAAVIPGLALLWAVGLGSAAPSPPRLALHRCAAHGRVCTECCLARDPYCAWDGVACTRFQPSAKRRFRRQDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQARVEWTFQRAGVTAHTQVLAEERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSLHVLSATQAERLARAEEAAPAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLPLESRRKGRNRRTHAPEPRAERGPRSATHW |
Prediction | 75535114204443013010201144202303033143036103401324232022336324313444433312434533424412444343343333322024444220303152430302031455735464324356313415300002203572303020214554133212403030254742554444555454335543321420120133373443424432554464645526755444324524764656232331467 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCHHHHCCCCCCCSSSSSSSCCCCSSSSSHHHCCCCCCHHHHHHHCCCCCCCCCCCCCSSSCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSCCCSSSSSSCCHHHCSSSSSSSSSCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSSCCCCCCCCCCSSCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC MGRAGAAAVIPGLALLWAVGLGSAAPSPPRLALHRCAAHGRVCTECCLARDPYCAWDGVACTRFQPSAKRRFRRQDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECEPRSLQARVEWTFQRAGVTAHTQVLAEERTERTARGLLLRRLRRRDSGVYLCAAVEQGFTQPLRRLSLHVLSATQAERLARAEEAAPAAPPGPKLWYRDFLQLVEPGGGGSANSLRMCRPQPALQSLPLESRRKGRNRRTHAPEPRAERGPRSATHW | |||||||||||||||||||
1 | 3nvqA | 0.21 | 0.13 | 4.25 | 1.62 | SPARKS-K | AAAIQTMSLDAERRKLYVSS----QWEVSQVPLDLCEVYGGGCHGCLMSRDPYCGWDQGRCISIYSSERS--VLQSINPAEPHKECPNPKPDKAPL-QKVSLAPNSRYYLSCPMESRHATYSWRHKENVEQSCEPGHQSPN-----CILFIENLTAQQYGHYFCEAQEGSYFREAQHWQLLPED------------------------------------------------------------------------------------- | |||||||||||||
2 | 3nvqA | 0.21 | 0.13 | 4.14 | 1.37 | FFAS-3D | ---IQTMSLDARRKLYVS-----SQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCGWDQGRCISIYSSERS--VLQSINPAEPHKECPNPKPD-KAPLQKVSLAPNSRYYLSCPMESRHATYSWRHKEN-----VEQSCEPGHQSPNCILFIENLTAQQYGHYFCEAQEGSYFREAQHWQLLPED------------------------------------------------------------------------------------- | |||||||||||||
3 | 3nvqA | 0.21 | 0.13 | 4.25 | 3.33 | CNFpred | AAAIQTMSLDAERRKLYVSSQ----WEVSQVPLDLCEVYGGGCHGCLMSRDPYCGWDQGRCISIYSS--ERSVLQSINPAEPHKECPNPK-PDKAPLQKVSLAPNSRYYLSCPMESRHATYSWRHKE-----NVEQSCEPGHQSPNCILFIENLTAQQYGHYFCEAQEGSYFREAQHWQLLPED------------------------------------------------------------------------------------- | |||||||||||||
4 | 4f91B | 0.08 | 0.06 | 2.47 | 0.67 | DEthreader | -LPALKPKPFEQLLPVEAQAG-----FEGFKTLNRIQS--LCAPTGAGKTNVA--------------------LMCMLEFKI-IYIAPMRSLVLTGDHQL------RKGGERTLIIL-ILEALA---E-VSKLPMLNAEIVLGNVWY---FQVTELGRIAYYI-------------SGRRAELNRGTWHHEYFLLSDR--SH-QTRLLSMAKPVYHAITSPKKPVIVTRTAVGYLHEGLS--RHHENLLRQLAQKLNNP-VN-ICLPAL | |||||||||||||
5 | 1olzA | 0.27 | 0.17 | 5.25 | 1.50 | SPARKS-K | FEPVQTLLLSSKNRFVYAGS----NSGVVQAPLAFCGKH-GTCEDCVLARDPYCAWSPPTCVALHQESPSRGLIQEMS--GDASVCPDKSKG---SYRQHFFKHGGTAELKCSQKSNLARVFWKFQNGVLKAESPK----YGLMGRKNLLIFNLSEGDSGVYQCLSEERTVFQVVAKHVLEVKV------------------------------------------------------------------------------------- | |||||||||||||
6 | 1olzA | 0.26 | 0.16 | 4.93 | 0.79 | MapAlign | ---QTLLLSSKKGNRFVYAGS---NSGVVQAPLAFCGKHG-TCEDCVLARDPYCAWSTATCVALHQTESPGLIQEMSGDASVCPDKSK------GSYRQHFFKHGGTAELKCSQKSNLARVFWKFQ-----NGVLKAESPKYGLMRKNLLIFNLSEGDSGVYQCLSEERTVFQVVAKHVLEVKV------------------------------------------------------------------------------------- | |||||||||||||
7 | 6qp7A | 0.20 | 0.12 | 3.93 | 0.54 | CEthreader | NEAIQVMEISQTRKSLYIGT----DHRIKQIDLAMCNRRYDNCFRCV--RDPYCGWDKEANTCRPYELDLLQDVANE---------TSDICDSSVLKKKIVVTYGQSVHLGCFVKIPNEQVTWYHHSKDKGRYEIRYSPTKYIETERGLVVVSVNEADGGRYDCHLGG----SLLCSYNITVDAHR----------------------------------------------------------------------------------- | |||||||||||||
8 | 6efyA | 0.15 | 0.14 | 4.65 | 0.74 | MUSTER | VESISNVSVAVGRDATFTCHVRHLGGYRVGWLKAD-TKAIQAIHENVITHN------PRVTVSHLDQNTWNLHIKAVSNTDPMKSQIGFDFISEDTSSDVIVPEGSSVRLTCRARGPEPIVTWRREDGNVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTPKSINYWIKDTGEMIVTSGKYHV------QESSQSMYETKMSMIVRKFQKDDVSLGEVDSSPH----- | |||||||||||||
9 | 3nvqA | 0.22 | 0.14 | 4.35 | 0.79 | HHsearch | AAAIQTMSLDAERRKL---YVSSQW-EVSQVPLDLCEVYGGGCHGCLMSRDPYCGWDQGRCISIYSSE--RSVLQSINPAEPHKECPNPKP-DKAPLQKVSLAPNSRYYLSCPMESRHATYSWRHKENVEQS-----CEPGHQSPNCILFIENLTAQQYGHYFCEAQEGSYFREAQHWQLLPED------------------------------------------------------------------------------------- | |||||||||||||
10 | 1olzA | 0.27 | 0.17 | 5.25 | 1.32 | FFAS-3D | -GALHKAISLEHAVHIIEETYAGSNSGVVQAPLAFCGKH-GTCEDCVLARDPYCAWSPPTATCVALHQTESPLIQEMSGDA--SVCPDKS---KGSYRQHFFKHGGTAELKCSQKSNLARVFWKFQNGVLKAE----SPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNQVVAKHVLEV--------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |