Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVTLVPPPPDTMSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA |
1 | 3c98B | 0.19 | 0.12 | 3.82 | 1.17 | SPARKS-K | | -------------------------------------------------------------------------------KDRTQELRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTSEELEDMLESGNPAIFASGIIMDSSISK-----------------QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAV------------------------------------ |
2 | 3c98B | 0.19 | 0.12 | 3.90 | 1.26 | MUSTER | | -------------------------------------------------------------------------------KDRTQELRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAIPNPDEKKEELEELMSDIKKTANKVRSKLKSIEQSIEQEELNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMDS---------------SISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAV------------------------------------ |
3 | 2xheB | 0.17 | 0.10 | 3.25 | 3.48 | HHsearch | | ----------------------------------------------------------DRLSRLRQMAAE--------------NQPEPFMADFFNRVKRIRDNIEDIEQAIEQVAQLHTESAVSKEDNEKLQDTMARISALGNKIRADLKQIEKENKRAQDGTVSTDLRIRQSQHSSLSRKFVKVMTRYNDVQAENKRRYGENVAR--QCRVVEPSLSD--------------DA---------------I-QK-VI--EHGNEIRDRHKDIQQLERSLLELHEMFTDMSTLVASQGEMIDRIEFSVEQSHNYV---------------------------------------- |
4 | 3c98B | 0.21 | 0.13 | 4.21 | 1.63 | FFAS-3D | | ---------------------------------------------------------KDRTQEL----------------------RDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK---------------QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERA------------------------------------- |
5 | 3c98B | 0.17 | 0.09 | 2.86 | 0.67 | DEthreader | | -------------------------------------------------------------------------------------D-R-FMDEFFEQVEEIRGFIDKIAENVEEVKRKHSALASNPDTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEELNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGR--------------------------------------IMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGE-I---Y---H-VD------------------------------------------- |
6 | 1fioA | 0.16 | 0.08 | 2.71 | 1.04 | SPARKS-K | | ---------------------------------------------------------------------------------------MHDFVGFMNKISQINRDLDKYDHTINQVDSLHKRLLTEVNERHSLDNFVAQATDLQFKLKNEIKSAQRDGIHD---------TNKQAQAENSRQRFLKLIQDYRIVDSNYKEENKEQAKRQYMIIQ----------------------PEATEDEVEAAISDVGGQQIFSQAKTALAEVQARHQELLKLEKSMAELTQLFNDMEELVIEQQ--------------------------------------------------------- |
7 | 3c98B | 0.17 | 0.10 | 3.32 | 1.00 | MapAlign | | ----------------------------------------------------------------------------------------RFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEELNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTT---------------TSEELEDMLESGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVE---------------------------------------------- |
8 | 3c98B | 0.19 | 0.12 | 3.83 | 0.82 | CEthreader | | -------------------------------------------------------------------------------KDRTQELRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIF---------------ASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAV------------------------------------ |
9 | 2xheB | 0.16 | 0.10 | 3.17 | 1.11 | MUSTER | | ----------------------------------------------------------DRLSRLRQMA--------------AENQPEPFMADFFNRVKRIRDNIEDIEQAIEQVAQLHTESAVSKEDNEKLQDTMARISALGNKIRADLKQIEKENKRAQQEGTFTDLRIRQSQHSSLSRKFVKVMTRYNDVQAENKRRYGENVARQCRVVEPSLSDD-----------------------------------AIQKVIEHGNEIRDRHKDIQQLERSLLELHEMFTDMSTLVASQGEMIDRIEFSVEQSHNYV---------------------------------------- |
10 | 3c98B | 0.20 | 0.12 | 3.89 | 3.44 | HHsearch | | -----------------------------------------------------------------------KDRT-------Q-ELRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAIPNPDEKKEELEELMSDIKKTANKVRSKLKSIEQSIEQEELNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQ--LEITGRTTTS--------------EE----LEDMLESGNPAIFASGSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAV------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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