>Q13057 (249 residues) QLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYVIGLTGISGSGKSSIA QRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGIINRKVLGSRVFGNKK QLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQNLVHEVWTAVIPETE AVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHITQRQVEKAWALLQKR IPKTHQALD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | QLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHITQRQVEKAWALLQKRIPKTHQALD |
Prediction | CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHCCCCSSSHHHHHHHHHHCCHHHHHHHHHHHCHHHCCCCCCSCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCHHHCCSSSSSSCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC |
Confidence | 954455666544331463477799712113787556788998779998389866699999999990992996579899986179799999999839565289998269999999977999999999867199999999999999972998999981343113937749989999889999999999805999999999999369999999869989969999999999999999999999598786309 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | QLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHITQRQVEKAWALLQKRIPKTHQALD |
Prediction | 833647445644342121243235200420413463472452010000001100100100410472401001014003301454460052017303740136615101530152026365215303510033015203510550465633000000002022403410220101303461013001523714363034006401436401620420224724264025204500630373155436648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHCCCCSSSHHHHHHHHHHCCHHHHHHHHHHHCHHHCCCCCCSCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCHHHCCSSSSSSCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QLLKDLRHTENEEDKVSSSSFRQRMLGNLLRPPYERPELPTCLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGIINRKVLGSRVFGNKKQLKILTDIMWPIIAKLAREEMDRAVAEGKRVCVIDAAVLLEAGWQNLVHEVWTAVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSHVVLSTLWEPHITQRQVEKAWALLQKRIPKTHQALD | |||||||||||||||||||
1 | 2f6rA | 0.79 | 0.72 | 20.32 | 1.33 | DEthreader | ----------YQI-QLL-K-QRILGNL-LQPPNERPELPSG-LYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRL--P----- | |||||||||||||
2 | 2f6rA | 0.83 | 0.77 | 21.74 | 1.65 | SPARKS-K | ------------ALYQIQLLKDQRILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
3 | 2f6rA | 0.82 | 0.75 | 21.08 | 1.18 | MapAlign | --------------IQLLKDQRILGNLL--QPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
4 | 2f6rA | 0.83 | 0.77 | 21.74 | 0.87 | CEthreader | ------------ALYQIQLLKDQRILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
5 | 2f6rA | 0.87 | 0.79 | 22.16 | 1.49 | MUSTER | QLLKDQ-----------------RILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
6 | 2f6rA | 0.88 | 0.79 | 22.27 | 1.38 | HHsearch | QLLKD-----------------QRILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
7 | 2f6rA | 0.84 | 0.77 | 21.62 | 2.65 | FFAS-3D | -----------YQIQLLK---DQRILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRL-------- | |||||||||||||
8 | 2f6rA | 0.83 | 0.75 | 21.07 | 0.92 | EigenThreader | ----------ALYQIQLDQ-------RILGNPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
9 | 2f6rA | 0.87 | 0.77 | 21.70 | 1.92 | CNFpred | ----------------------QRILGNLLQPPNERPELPSGLYVLGLTGISGSGKSSVAQRLKNLGAYIIDSDHLGHRAYAPGGPAYQPVVEAFGTDILHKDGTINRKVLGSRVFGNKKQMKILTDIVWPVIAKLAREEMDVAVAKGKTLCVIDAAMLLEAGWQSMVHEVWTVVIPETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVEQSNVVLSTLWESHVTQSQVEKAWNLLQKRLP------- | |||||||||||||
10 | 4i1uA | 0.23 | 0.19 | 5.91 | 1.17 | DEthreader | -------------------------------------HHH--MYAIGLTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRALIFSDEDARRRLEAITHPLIRAETEREARDA--Q-GPYVIFVVPLLVESNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQVEAIIARQATREARLAAADDVIVNDATPDALAVQVDALHQRYLAFAAAKH---- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |